Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00879 ATGGATTCTTCGATCTCTCACTTCAGAGCCTCCGCGAATTCCTTCCTCTCCCAATACGAACCTCTCGCTTTGCTTCTCGCTCCTCTCCTCTCTCTCCTCTTCGCCCTCGCTCTCCGCTCCTTCTTCCACCTCCTCTCCGAGAACGGACTCAAAGCCACGCTCCTAGGGTTTCTCATTAACTCCTTCAAATTGGTCCCAGGTGTGAAGAGATACATAGATGCCGAAAAACAAAAGGTTGTGGATAAGTTGCAATCTGATAGTAAATCTAAAAGAGAAGGTTGGAAAACTGAGTTGCCAAGCACAGGATTAGGGACAACTGTCCTTGAGAAAATGAGAGAGGAGAAAATTAATGACGCAGTTTGGCAAGGCAAATGCTCTGGTACAGTCTACATTGGAGGAAGTGAATCTGATGGACATTTTTCTCTGATAAATGAGGCATGTTCAATGTTTGCACATACCAATCCCCTGCATTTGGATGTATTCAAGAGTGTTGCACGCTTTGAGGCAGAAGTGGTTGCAATGACAGCAGCACTTCTTGGAAGTAAGGAAAAAAGTTCTGGAGGACAAATATGTGGCAACATGACATCCGGCGGGACTGAAAGTATATTATTAGCTGTCAAATCATCTCGTGACTATATGAAATCTAAGAAAGGAATTACAAGACCTGAAATGATTATTCCCGAGTCTGGACACTCAGCATATGACAAGGCTGCACAGTATTTTAATATCAAATTATGGCGTGCACCAGTTAACAAGAATTTTCAAGCAGATGCGAAAGCTATTCGACGTCACATTAACAAAAATACCATCTTGATTGTTGGATCTGCTCCTGGGTTTCCTCATGGAGTAATTGACCCCATCGAAGAACTTGGTCATCTGGCATCAAGCTTTGGTATTTGTTTCCATGTGGACCTTTGCCTTGGTGGCTTTGTACTACCATTTGCTCGTGAGCTTGGGTACCACATTCCACCTTTTGATTTTTCTGTTAAAGGGGTTTCTTCAATATCAGTTGATGTACATAAATACGGTTTAGCTCCCAAAGGAACAAGTGTAGTTCTTTATAGAAACCATGAAATCAGAAAGCATCAATTTGTTGCTGTTACCGAATGGTCTGGTGGGTTGTATGTGTCTCCAACCATAGCTGGAAGCAGGCCTGGAAGTCTTATTGCTGGTGCATGGGCAGCGATGATGTCTCTAGGGAAAGAAGgttacttgaaaaatacaAAAGCAATTATGGAAGGGTCAAGAAGAATACAGAAAGGCATAGAGGAGATTGCTGAGTTGTTTATTGTTGGAAAACCTGACATGACGATAGTGGCTTTTGGATCTGCTGTTCTGGATATATTCGAAGTCAATGATGTTATGTCATCCAAAGGGTGGCATTTGAATGCATTACAGAGACCCAACAGCATCCATATCTGTGTGACCCTGCAACATGTGCCAATTGTTGAAGACTTTCTCAATGATTTGAAGGAATCTGTGAAAACTGTGAAAGCAAATCCAGGTCCAATAAGTGGAGGCCTAGCACCTATATATGGTGCCGCAGGGAAGATGCCAGATAGAGGCATGGTCCAGGAATTGCTGGTAGATTATATGGATGGTACCTGCTAA 1611 0.4264 MDSSISHFRASANSFLSQYEPLALLLAPLLSLLFALALRSFFHLLSENGLKATLLGFLINSFKLVPGVKRYIDAEKQKVVDKLQSDSKSKREGWKTELPSTGLGTTVLEKMREEKINDAVWQGKCSGTVYIGGSESDGHFSLINEACSMFAHTNPLHLDVFKSVARFEAEVVAMTAALLGSKEKSSGGQICGNMTSGGTESILLAVKSSRDYMKSKKGITRPEMIIPESGHSAYDKAAQYFNIKLWRAPVNKNFQADAKAIRRHINKNTILIVGSAPGFPHGVIDPIEELGHLASSFGICFHVDLCLGGFVLPFARELGYHIPPFDFSVKGVSSISVDVHKYGLAPKGTSVVLYRNHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGSLIAGAWAAMMSLGKEGYLKNTKAIMEGSRRIQKGIEEIAELFIVGKPDMTIVAFGSAVLDIFEVNDVMSSKGWHLNALQRPNSIHICVTLQHVPIVEDFLNDLKESVKTVKANPGPISGGLAPIYGAAGKMPDRGMVQELLVDYMDGTC 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00879 536 Gene3D - 133 400 IPR015421 GO:0003824
Gma02g00879 536 SUPERFAMILY PLP-dependent transferases 71 500 IPR015424 -
Gma02g00879 536 PANTHER SPHINGOSINE-1-PHOSPHATE LYASE 1 16 536 - -
Gma02g00879 536 Gene3D Aspartate Aminotransferase, domain 1 105 499 IPR015422 GO:0003824
Gma02g00879 536 Gene3D - 96 533 - -
Gma02g00879 536 Pfam Pyridoxal-dependent decarboxylase conserved domain 153 441 IPR002129 GO:0016830|GO:0019752|GO:0030170
Gma02g00879 536 PANTHER - 16 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00879 Gma-Chr2 8845558 8851266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00879 152 496 Calmodulin-binding Proteins AT3G17760 26.703 7.54e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00879 K01634 - gmx:100794743 1042.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00879 02 8845558 8851266 Gma02g00879 02 8845558 8851266 ECH