Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00859 ATGATGGTATCGAGAGGTTTGTTCGGGTGGTCCCCGCCGCACGTGCAACCGCTCACGCCGGTTTCGGAGGTGTCGGAGCCTCCGGAGTCGCCGTCGCCGTACCTGGACCCCAGCGCCGAGACGTCCGCGTCGCAGCAGTTGGAGGCGGAGGAGGAGATGGAGGAGCCGGAGGAGATCGAGCCGCCGCCCGCCGCGGTTCCGTTTTCGCAGCTCTTCGCATGCGCCGACCGCTTCGATTGGTTTCTCATGGCCGTCGGTTCCGTCGCTGCTGCGGCGCACGGCACCGCGCTCGTCCTTTACTTGCACTACTTCGCGAAGATCATCCACGTGCTGCGGTTGGATCCTCCGCACGGCACGTCGCAGGAGCAGTTTGACAGGTTCACCGAGCTTGCTTTAACTATTGTTTATATTGCTGCGGGAGTTTTTGTTGCTGGTTGGATTGAGGTTTCATGTTGGATTTTGACGGGAGAACGGCAGACTGCTGTCATCAGGTCAAAATATGTTCAAGTACTACTTAATCAAGACATGAGTTTTTTTGATACTTATGGGAATAATGGAGACATAGTGAGTCAAGTATTAAGTGATGTGTTGCTTATCCAGTCCGCCCTCAGTGAAAAAGTTGGAAATTATATTCATAATATGGCTACATTCTTCAGTGGTCTTGTCATTGGCCTTGTCAATTGTTGGCAGATTGCTTTGATAACGTTAGCCACGGGTCCATTTATTGTTGCTGCTGGAGGAATATCAAACATATTCCTTCATAGGCTTGCAGAGAATATCCAAGATGCATATGCTGAAGCAGCTAGCATTGCTGAACAGGCAGTTTCCTATATAAGGACATTGTATGCATTTTCAAATGAAACTTTGGCCAAGTATTCATATGCAACATCACTGCAAGCTACTCTTAGATATGGTATATTAATCAGTCTTGTTCAAGGGCTTGGTCTTGGATTTACGTATGGACTAGCAATATGTTCTTGTGCATTACAACTCTGGGTTGGAAGATTCTTGGTTATTCACGGAAAAGCGCATGGTGGTGAAATTATAACAGCTCTTTTTGCTGTAATTCTAAGTGGCCTGGGATTGAATCAAGCAGCGACAAATTTCTACTCATTTGATCAGGGACGAATAGCTGCTTATAGACTATTTGAGATGATAAGTCGGTCATCCTCATCTGTTAATCATGATGGCACTTCCCCTGATTCTGTGCAAGGAAATATAGAGTTCCGGAATGTTTATTTCAGCTATCTGTCTCGTCCTGAAATCCCTATCTTGAGTGGATTTTATCTCACTGTACCTGCTAAGAAAGCTGTAGCACTTGTTGGCAGAAATGGCTCTGGAAAAAGTAGTATTATTCCACTCATGGAGCGTTTTTATGATCCTACATTAGGAGAAGTTCTTTTAGATGGTGAAAATATAAAAAATTTGAAACTGGAATGGCTGAGGAGCCAAATAGGACTAGTCACCCAGGAGCCTGCTTTGCTCAGTTTGAGTATAAGAGACAACATTGCTTATGGGAGGGATGCCACCATGGATCAAATTGAAGAGGCTGCTAAAATAGCTCATGCGCATACATTTATCAGCTCATTAGAGAAGGGTTATGACACACAGGTTGGCAGGGCTGGTCTATCTTTGACCGAAGAGCAGAAAATAAAACTTTCTATTGCTAGAGCTGTGCTTCTAAATCCATCAATTCTTCTTCTTGATGAGGTTACTGGTGGACTTGATTTTGAGGCTGAGAGGGCTGTTCAGGGGGCTCTGGATTTGCTTATGTTGGGACGCTCAACAATAATAATTGCTCGAAGGCTTAGTCTCATAAAGAATGCTGACTATATAGCCGTTATGGAGGAAGGCCAGCTTGTTGAAATGGGTACTCATGACGAATTATTGGCACTGGATGGCTTATATGCAGAGCTTCTTCGATGTGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCTGTTCGAAACTACAAGGAAACTTCAGCCTTCCAAATTGAGAAGGATTCTTCGAGTCATAGCTTCAAAGAACCATCATCCCCTAAAATGATTAAGTCGCCCTCTCTTCAAAGAGTTTCTAATGCATCCCGACCTCCAGATGGCGCCTTTAACTTGCTAGAATCACCAAAAGTCCAGAGCCCACCGTCTGAGAAAATGCTTGAAAATGGTCTGGCATTGGATGCAGCAGATAAGGAGCCATCAATAAGAAGGCAGGATAGTTTTGAAATGAGACTGCCAGAGTTACCCAAGATTGATGTTCATTCTGTGCATCGACATATGTCAAATGAGTCTGACCCAGAATCTCCCATTTCACCTCTTTTAACATCTGATCCTAAAAGTGAACGCTCCCATTCACAGACTTTTAGTAGACCACTTAGTCATTCTGATGATGTTTCAGTTAAAATGAGAGAAACAAAGGGTGCACGGCATCGAAAACCACCATCACTGCAGAAGCTGGCTGAGCTTAGTTTTACTGAGTGGCTTTATGCTGTGTTAGGAAGCATAGGTGCTGCTATCTTTGGGTCTTTCAATCCCCTTCTTGCTTATGTTATTGGTCTTGTGGTGACAGCTTACTATAGAATTGATGACCCTCATCACCTTGAACGGGAGGTAGACAGGTGGTGCTTGATCATTGGCTGCATGGGTATTGTGACTGTAGTTGCCAACTTTTTACAGCATTTCTACTTTGGTATTATGGGAGAGAAAATGACAGAAAGAGTTAGGAGAATGATGTTCTCAGCCATGCTACGCAATGAAGTGGGATGGTTTGATGATGAGGAAAACAGTGCTGACAATTTGTCCATGCGATTGGCCAATGATGCTACTTTTGTGCGAGCTGCTTTTAGCAACAGGCTTTCCATATTTATACAGGACAGTGCTGCAGTTATTGTTGGTCTTCTCATTGGTGCTTTGCTGCACTGGCGGTTAGCACTTGTGGCTTTTGCAACCTTTCCAATTCTCTGTGTTTCTGCCATTGCCCAGAAATTTTGGCTTGCTGGATTTTCGAGGGGCATCCAGGAAATGCACCGAAAGGCATCTTTGGTTCTTGAAGATGCAGTTAGGAACATTTACACTGTTGTTGCCTTTTGTGCTGGTAACAAGGTAATGGAGCTCTACAGGCTGCAATTAAAGAAAATATTTAAGCAGAGCTTTCTTCATGGGATGGCAATTGGTTTTGCATTTGGCTTTTCACAGTTTCTACTTTTTGCTTGTAATGCCCTGCTACTTTGGTACACTGCAATATGTATAAAACGTGGTTACATGGATCCACCTACTGCACTCAAGGAGTACATGGTTTTCTCATTTGCAACATTTGCACTTGTGGAGCCTTTTGGATTGGCTCCTTACATACTTAAACGACGAAAATCTCTCATATCCGTGTTTGACATTATAGATCGTGTGCCTATAATTGATCCTGATGATAGCTCAGCATTGAAGCCACCCAATGTATATGGAAGCCTCGAGTTAAAAAATGTTGATTTTTGTTACCCATCTCGTCCTGAAGTGTTGGTATTGAGCAATTTTAGCCTCAAAGTCACTGGGGGCCAAACAGTTGCTATTGTGGGAGTTTCTGGGTCAGGAAAGAGCACTATAATATCTTTGATTGAGAGGTTTTATGACCCAGTTGCAGGCCAAGTTTTCCTGGATGGTAGGGACTTAAAGCAATATAACTTGAGATGGTTGAGGAGCCACCTTGGTCTGGTTCAGCAGGAACCTATTATCTTCTCAACAACCATAAGGGAAAACATCATATATGCAAGGCATAATGCAACTGAAGCTGAGATGAAAGAGGCTGCAAGAATAGCGAATGCTCATCATTTCATTAGCAGCTTGCCTCATGGTTATGACACTCATGTTGGGATGAGAGGTGTTGACTTAACCCCAGGGCAGAAACAGAGAATTGCAATTGCTAGGGTAGTGCTGAAAAATGCCCCTATCTTGTTGTTGGATGAAGCTAGTTCAGCAATTGAATCTGAGTCAAGCCGAGTAGTGCAAGAGGCAATAGACACACTAATAATGGGAAACAAGACAACTATTCTAATAGCGCATAGGGCTGCAATGATGAGGCATGTGGACAATATTGTAGTGCTTAATGGAGGACGGATAGTGGAGGAGGGCAGTCATGATACATTGGTAGCAAAGAATGGTTTGTATGTCCGACTGATGCAACCTCATTTTGGTAAGGCTTTGCGTCAGCATAGGCTTGTTTAG 4209 0.4402 MMVSRGLFGWSPPHVQPLTPVSEVSEPPESPSPYLDPSAETSASQQLEAEEEMEEPEEIEPPPAAVPFSQLFACADRFDWFLMAVGSVAAAAHGTALVLYLHYFAKIIHVLRLDPPHGTSQEQFDRFTELALTIVYIAAGVFVAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGLVNCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFSNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHGKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSVNHDGTSPDSVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATMDQIEEAAKIAHAHTFISSLEKGYDTQVGRAGLSLTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQGALDLLMLGRSTIIIARRLSLIKNADYIAVMEEGQLVEMGTHDELLALDGLYAELLRCEEAAKLPKRMPVRNYKETSAFQIEKDSSSHSFKEPSSPKMIKSPSLQRVSNASRPPDGAFNLLESPKVQSPPSEKMLENGLALDAADKEPSIRRQDSFEMRLPELPKIDVHSVHRHMSNESDPESPISPLLTSDPKSERSHSQTFSRPLSHSDDVSVKMRETKGARHRKPPSLQKLAELSFTEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYYRIDDPHHLEREVDRWCLIIGCMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDDEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVGLLIGALLHWRLALVAFATFPILCVSAIAQKFWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFLHGMAIGFAFGFSQFLLFACNALLLWYTAICIKRGYMDPPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFDIIDRVPIIDPDDSSALKPPNVYGSLELKNVDFCYPSRPEVLVLSNFSLKVTGGQTVAIVGVSGSGKSTIISLIERFYDPVAGQVFLDGRDLKQYNLRWLRSHLGLVQQEPIIFSTTIRENIIYARHNATEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSAIESESSRVVQEAIDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGSHDTLVAKNGLYVRLMQPHFGKALRQHRLV 1402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00859 1402 MobiDBLite consensus disorder prediction 675 696 - -
Gma02g00859 1402 MobiDBLite consensus disorder prediction 795 811 - -
Gma02g00859 1402 MobiDBLite consensus disorder prediction 764 793 - -
Gma02g00859 1402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1142 1389 IPR027417 -
Gma02g00859 1402 MobiDBLite consensus disorder prediction 664 718 - -
Gma02g00859 1402 SUPERFAMILY ABC transporter transmembrane region 71 382 IPR036640 GO:0005524|GO:0016021
Gma02g00859 1402 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 407 642 IPR003439 GO:0005524
Gma02g00859 1402 MobiDBLite consensus disorder prediction 1 61 - -
Gma02g00859 1402 Gene3D ABC transporter type 1, transmembrane domain 1000 1150 IPR036640 GO:0005524|GO:0016021
Gma02g00859 1402 Gene3D ABC transporter type 1, transmembrane domain 769 994 IPR036640 GO:0005524|GO:0016021
Gma02g00859 1402 Gene3D - 397 644 IPR027417 -
Gma02g00859 1402 PANTHER ABC TRANSPORTER B FAMILY 19 1398 - -
Gma02g00859 1402 CDD ABC_6TM_Pgp_ABCB1_D2_like 825 1136 - -
Gma02g00859 1402 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 830 1122 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma02g00859 1402 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 1398 - -
Gma02g00859 1402 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 382 - -
Gma02g00859 1402 SMART AAA_5 1180 1367 IPR003593 -
Gma02g00859 1402 SMART AAA_5 434 613 IPR003593 -
Gma02g00859 1402 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 84 374 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma02g00859 1402 Gene3D - 1151 1390 IPR027417 -
Gma02g00859 1402 Coils Coil 253 273 - -
Gma02g00859 1402 Pfam ABC transporter 1171 1319 IPR003439 GO:0005524
Gma02g00859 1402 Pfam ABC transporter 428 572 IPR003439 GO:0005524
Gma02g00859 1402 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1153 1390 IPR003439 GO:0005524
Gma02g00859 1402 SUPERFAMILY ABC transporter transmembrane region 817 1138 IPR036640 GO:0005524|GO:0016021
Gma02g00859 1402 MobiDBLite consensus disorder prediction 756 811 - -
Gma02g00859 1402 Pfam ABC transporter transmembrane region 835 1099 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma02g00859 1402 Pfam ABC transporter transmembrane region 87 357 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma02g00859 1402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 397 641 IPR027417 -
Gma02g00859 1402 Gene3D ABC transporter type 1, transmembrane domain 70 660 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00859 Gma-Chr2 8611294 8619398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00859 53 698 Calmodulin-binding Proteins AT2G36910 43.558 8.90e-167 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00859 K05658 - gmx:100789116 2653.24