Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00854 ATGTCTTATCAGCATAAAAGCTTTTGGATGCCACGAGATGCTGGCTGCATGGCTGAAGAAAATGTGGGATATGAAAATTCTTCCAGAGTAGAATCCAAGCGCAGTCATAAGTGGTTTATGGATGCAGGTGAACCTGAAATATTCAGCAACAAGAAACAAGCAGTTGAAGCTGTTAGTGGCCGGCCAGTTTCTGGAGTTTCACATGCAAATGTTTCCCAATGGGACAACAATTCAGGATTTCACTCAGTCACAAGTCAATTTTCTGACCGTCTTTTTGGATCTGATCTTGCTAGGACTGTGAATTTGGTTGATAAGAATGTGCCATCCATTGTAAGTGGAAATCTGAACATGGGAAGGAAGGATTTTGAGCATCAATACGGTAATGATCCTTCTGTGGGATTGTCAATGTCTCATTCCATAGCAGACACTTCATCATGTCTCAATTTTGGTGGCATCAGAAAAGTTAAAGTTAATCAAGTCAGAGATTCTGACAACTGCATGCCTGCTGCATCTATGGGGCACTCCTATAGTAGGGAAGATAATAGTACAATTTCAGTAGGTGCTGGCTACAATAAGAATGATGGTGGCAATATTTCATTGGGTCCTACTTATAACAATGTAAATGACAACACCATTGCTATGGGGAGCAGAATGAGTAAGACCGATGACAATCTTCTTTCAATGGCTCACACCTTCAATAAAGGGGATGGGGGTTTTATGTTGCTGGGCCACAATTATGGCAAGGGAGATGAAAGTATCTtatcaatgggtcagccctttgacaagggagatggaaatttcatatcaatgggtcaatcatatgagaaggaagatggcaatttaatatcTCTGGGCACCTCATATACCAAGGGACATGAGAACTTTATACCAGTTGGTCCAACCTATGGTAAATCAGGAGAAAATTTCATAACTGTTGCTCCTTATGACAAGGGTACTGATCATATTATATCACTGGGTCCAACATATGATAAGGTGGATTCAAATATTGCATCAACAATTCCATCATTTGACAGAGGAGATTCTAGTTCATTACCTGTGGGTCAAAACCACCATAAGGGTCAGAACAGTTCCATATCTTTCGGAGGTTTTCATGATGACCCTGGACCAAATATCCCTAGCGGAATCATTAGTGGCTATGATCTGTTGATAGGAAGCCAGAACTCAGCTCAAGGTATGGATAGCCAGAACGACCTGACTGAGACAAACACTGAATCACTTGTAAATAGCATTCCAAAACCCAATACTAAAAATGATATTGTTAAGAACAAAGAGCCCAAGACAACCAAGAAGGCTCCTACTAACAACTTCCCTTCAAATGTCAAAAGTCTACTGTCAACTGGTATTTTTGATGGTGTTCAGGTGAAATATGTTTCATGGTCACGGGAGAAAAGTCTTAAGGGGATCATAAAAGGAACTGGGTATTTGTGTTCATGTGACAACTGCAACCAGTCAAAGGCTCTTAATGCATACGAGTTTGAGCGTCATGCTGGTGCCAAGACAAAACATCCTAACAATCACATATACTTTGAGAATGGAAAAACCATCTATGCTGTTGTTCAAGAGCTGAAAAACACTCCTCAGGATATGCTTTTTGATGCTATTCAAAATGTGACTGGCTCTACCATCAACCAAAAGAACTTTCGAATATGGAAAGCATCATACCAAGCTGCTACTCGGGAGCTTCAGCGTATCTATGGAAAGGATGATGTGGTCATTCCGTCTTGA 1746 0.3877 MSYQHKSFWMPRDAGCMAEENVGYENSSRVESKRSHKWFMDAGEPEIFSNKKQAVEAVSGRPVSGVSHANVSQWDNNSGFHSVTSQFSDRLFGSDLARTVNLVDKNVPSIVSGNLNMGRKDFEHQYGNDPSVGLSMSHSIADTSSCLNFGGIRKVKVNQVRDSDNCMPAASMGHSYSREDNSTISVGAGYNKNDGGNISLGPTYNNVNDNTIAMGSRMSKTDDNLLSMAHTFNKGDGGFMLLGHNYGKGDESILSMGQPFDKGDGNFISMGQSYEKEDGNLISLGTSYTKGHENFIPVGPTYGKSGENFITVAPYDKGTDHIISLGPTYDKVDSNIASTIPSFDRGDSSSLPVGQNHHKGQNSSISFGGFHDDPGPNIPSGIISGYDLLIGSQNSAQGMDSQNDLTETNTESLVNSIPKPNTKNDIVKNKEPKTTKKAPTNNFPSNVKSLLSTGIFDGVQVKYVSWSREKSLKGIIKGTGYLCSCDNCNQSKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQDMLFDAIQNVTGSTINQKNFRIWKASYQAATRELQRIYGKDDVVIPS 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00854 581 PANTHER N-LYSINE METHYLTRANSFERASE 1 581 - -
Gma02g00854 581 MobiDBLite consensus disorder prediction 411 444 - -
Gma02g00854 581 PANTHER AUTOIMMUNE REGULATOR 1 581 - -
Gma02g00854 581 SUPERFAMILY Porins 175 331 - -
Gma02g00854 581 Pfam Tify domain binding domain 474 529 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00854 Gma-Chr2 8564461 8569162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00854 433 562 PHD Transcription Factor Family AT3G53680 56.154 3.60e-42 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00854 - - gmx:100787520 1192.18