Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00848 ATGAGAGGTGCCAATTTGCCCAACATGTCAGAAGCTAGTTCTTATTCCATTGATATTGCAAAGATGAGAAATGCTCTTTTATCATCAGTTTCTTCTAGGTTTAACTGCTATGGAAATGATGAAGCTCAGTTTGAAATTTTAGAAGGCTCCATGCATATGAACGATCTAATTGACTTCCATATCAATGGCTTCAACATGGAGTCTAGAATATTCAACAATTACAGCCAATTAGGTCAAGGAGTCCATACACAGCCAAGCCAGTCTCAGTCTCTGATTTATGACTACAATCATTACCCAGGTAGTCTCTTTGCCATCCCAAGCAGCAAAGAAATTTCTCAGCAATCATTGTTACTTGACAAAGACCCTTCTCAGTATGAAGGAGTATGTGGAAATGCAAGAAAGCGTCCATTTGAGTACACTGACAACATGTCCTTGTGGAAAAAAGTGAAAAGCAATTCCAAAAGCAAAATTACAATCATGGAACCGAAATGGCATCAAGCAAAAGAAGTTTCAGAGATAATCCCTCCGCACAAAGTAACTAAAATTAAAAAGTTGCATGTGCCTATGATGACAAATCAGAAGCTTAGCAATAAAATTACAACTCTACAAAAGTTGGTTTCACCTTTTGGCAAGTGTGGCCTTGGCTTTCTGAATATCCTGCAGACTGACACCGCATCAGTTCTTCAGGAGGCTTCTCTTTATATCAAGCTTCTTCAAGCACAAATCCGGACTTTGTTTCAGATGCTGAGCTTCACTTACTTTAGCACGATTAATGATCCCCATACTCAGCTGGTGTCACGTCAGGAATGTGCGGACAAATTGGAGGTTGACCTAAGGAGCAGAGGACTTTGTTTGGTTCCCATATCAATCACAGACAAAATAACAAAGGTAGACCAGATTCATCATGCTTCGGCCTCAATAAATACTTAG 930 0.3957 MRGANLPNMSEASSYSIDIAKMRNALLSSVSSRFNCYGNDEAQFEILEGSMHMNDLIDFHINGFNMESRIFNNYSQLGQGVHTQPSQSQSLIYDYNHYPGSLFAIPSSKEISQQSLLLDKDPSQYEGVCGNARKRPFEYTDNMSLWKKVKSNSKSKITIMEPKWHQAKEVSEIIPPHKVTKIKKLHVPMMTNQKLSNKITTLQKLVSPFGKCGLGFLNILQTDTASVLQEASLYIKLLQAQIRTLFQMLSFTYFSTINDPHTQLVSRQECADKLEVDLRSRGLCLVPISITDKITKVDQIHHASASINT 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00848 309 PANTHER TRANSCRIPTION FACTOR BHLH112 45 297 - -
Gma02g00848 309 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 45 297 - -
Gma02g00848 309 CDD bHLH_AtbHLH_like 193 245 IPR045239 -
Gma02g00848 309 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 193 250 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00848 Gma-Chr2 8513831 8517116 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00848 175 289 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 47.899 1.64e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00848 - - gmx:102667232 429.098