Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00847 ATGGTGAACGCGATGGAGTGGCAGAAGCAGCGTTGTTGGCAACCAAACAGAAACGCGGAAATGATGTGCGTGAAAGTGATGACCGACGAACAGCTCGAGATTCTGCGCAAACAGATTGCGGTTTACGCAACAATCTGCGAACAACTCATCGAGATGCACAAAAACATCTCTGCACACCAAGATCTCGCAGGTATTAGGCTGGGGAATATGTATTGTGATCCATTGTTGGGGTCTGGTGGTCTCAAAATAGCTTCAAGGCAGCGGTGGACTCCAACTGCTATGCAGCTTCAGATTCTGGAGCGAATATTTGATCAAGGGATTGGGACTCCCACCAAGGAAAAGATCAAGGAGATCACTAATGAGCTCAGCCAGCATGGTCAGATTTCTGAGACCAATGTGTATAATTGGTTCCAGAACAGGCGGGCTCGCTCCAAAAGAAAGCAGCAGAATGTGGCGCCTAGTGCTAATGCTGAATCAGAAGTGGAGACTGAGGTTGATTCTAAGGATAAGAAGACAAAGCCGGACGAATTTCAGGCCCCTCCTAGCGTTTCTGCTGGGCCTGCTGATAATTTAGGCTTCCAGAACCATGATAGTTTGCAGTACTTGAATCCAGAATCCAACAAACCAGATTCTGTCTTCCCGTCTGATGGGACCAGAAATTTTCATCATGTGCCTGCTTTTGATGGGCTGCTATCAAACTCAAGGAGCAACTATCTTACTGGAAAACTGGAAACACCTGAGAACTACGAATTATACCAGCCAGCAGGTGACTACAACATTGCAGGTTGA 789 0.4702 MVNAMEWQKQRCWQPNRNAEMMCVKVMTDEQLEILRKQIAVYATICEQLIEMHKNISAHQDLAGIRLGNMYCDPLLGSGGLKIASRQRWTPTAMQLQILERIFDQGIGTPTKEKIKEITNELSQHGQISETNVYNWFQNRRARSKRKQQNVAPSANAESEVETEVDSKDKKTKPDEFQAPPSVSAGPADNLGFQNHDSLQYLNPESNKPDSVFPSDGTRNFHHVPAFDGLLSNSRSNYLTGKLETPENYELYQPAGDYNIAG 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00847 262 MobiDBLite consensus disorder prediction 144 220 - -
Gma02g00847 262 ProSiteProfiles 'Homeobox' domain profile. 82 147 IPR001356 GO:0003677
Gma02g00847 262 CDD homeodomain 86 148 IPR001356 GO:0003677
Gma02g00847 262 SMART HOX_1 84 151 IPR001356 GO:0003677
Gma02g00847 262 MobiDBLite consensus disorder prediction 188 214 - -
Gma02g00847 262 Pfam Homeodomain 86 146 IPR001356 GO:0003677
Gma02g00847 262 PANTHER WUSCHEL-RELATED HOMEOBOX 13 3 261 IPR044559 GO:0003700
Gma02g00847 262 SUPERFAMILY Homeodomain-like 84 149 IPR009057 -
Gma02g00847 262 PANTHER - 3 261 - -
Gma02g00847 262 Gene3D - 87 152 - -
Gma02g00847 262 MobiDBLite consensus disorder prediction 161 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00847 Gma-Chr2 8510867 8513428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00847 22 262 Wox Gene Family AT4G35550 52.016 1.41e-74 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gma02g00847 Homeodomain 3.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00847 - - gmx:100527354 539.65