Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00843 ATGGATAATTATGGATCATCTTCTCCTTACCGGTATCCAAGCCCATATATGTACCCTCCCAATCCTCATCAACCGTACCCTCCTCCTCCAGGTTCAGCTCCTGATCCATATGCACAGCATGTTCCTTATCAACCATATCCTTACCTTTCTTCACATTCCTTCAACTATTCCTATCCTCCACCTCCTAGACCTTCCTCACATTCTGGCCATTTTGAGTATTCCTATACTCCTCCTCCTCACCCTTCTGATTTTCCCTACCCCCCTCCACCTTATTATGCTCATCCTCCATCTTATCCTTATCCCTACCATGTTCCTCCACCAAATCATGATCCTTCCAAGCCTTCCCTTTCATACCATGCTAGTTTCCAACATGGATCATCTCATTATTATTATCAACAACCAAACCAGGCCTATTCAGCTTCGGCTCCTGAAGTCCAACCTGATATCCACTCGCACACCAATAGCTACTCTGGTCCCTACTGGCAGGAGAACACAAGCACTGCAGCAGATGAAGTGTCACAAGCTAGTGATAGTTCCAAGCCTTCTCAGGGTTCTGCTTACCCGCCTTTGGATGATCTTATGAGCAATGTTCGGTTGTCTGATGGCCAGCCAACTGCTCCTGCATCGCCACCTGCACCTGCAAGGCAACCATTTATGCATTCCATTTCAGTTCCAAAGTTGCAACAGAAGAGAGAGGAATTTTATGGATATTCGAATAACTCCTTCTCGGGGTGGGGATCCTCCTACCACAGTCAGGTGGATTCGTCTAGGCTTTCTGATTTTTCTGGCTCATTTAATGAATCAATGCATAGTCAGAGTTTGCAGATTGTTCCAGTGCAGAATAAAGGGTCCTTGAGAGTTTTGCTGCTACATGGAAATTTAGATATATGGATCCATGAAGCCAAGAACCTTCCAAATATGGACATGTTTCACAAAACATTAGGAGATATGTTTGGTAAATTACCTGGTAGTGTGGGCAATAAAATTGAAGGAACTATGAATAAGAAGATTACTAGTGATCCTTATGTATCAATTTCAGTATCCAATGCTGTTATTGGGAGGACTTACGTCATTAGCAACTCCGAAAATCCTGTTTGGTTGCAACATTTCTATGTTCCTGTTGCGTATCATGCTGCTGAAGTGCACTTTCTTGTTAAAGACAACGATATTGTGGGTTCACAGCTCATTGGCATTGTGGCAATTCCAGTGGAGCAAATATACTCAGGAGCAGTAGTTGAAGGAACCTTTCCTATCCTGAATAATAATGGGAAGCCTTGTAAGCAAGGTGCTGTCCTGACCCTATCCATTCAGTACATACCTATGGAGAAATTGAGCATTTATCACCAAGGAGTTGGAGCAGGGCCAGAATACATTGGGGTTCCTGGCACATATTTTCCTTTGAGGAGGGGTGGAACCGTTACTCTGTACCAAGATGCTCATGTTCCAGATGGCAGCCTCCCTAATGTGTTGCTTGACAGTGGGATGTATTATGTGAATGGAAAGTGTTGGCAAGATATCTTTGATTCCATAAGTCAAGCTCGGCGTTTGATTTATATTACAGGATGGTCTGTGTGGCACAAAGTAAGGTTGGTTAGGGATGCTGCTGGTTATGCTTCAGATTATACCTTGGGTGATCTTGTAAAGTCAAAGTCACAGGAAGGAGTAAGAGTTCTTCTCCTTATCTGGGATGATCCTACGTCAAGAAGCATTTTTGGTTATAAAACAGATGGTGTCATGGCAACTCATGATGAGGAAACTCGTAGATTTTTTAAGCACTCTTCAGTGCAAGTGCTTCTTTGTCCTCGCAGTGGCAAACGACATAGCTGGATCAAGCAAAAGGAAGTTGGAACGATATATACACATCATCAGAAAACCGTGATTGTGGATGCTGATGCTGGAAATAATAGAAGAAAAATTATAGCATTTGTTGGTGGACTTGATTTGTGTGATGGGCGATATGATACTCCCCACCATCCTCTTTTTAGAACATTGAATACAATACATAAGGATGACTACCACAACCCTACTTTTACGGGTAATATTGGTGGTTGTCCGCGGGAGCCATGGCATGATTTGCATTCTAAAATTGATGGTCCAGCAGCTTATGATGTTTTAACTAACTTTGAGGAGCGCTGGTTAAAAGCTTCGAAACCTCACGGGATTAAAAAGTTGAAAATTTCATATGATGATGCTTTGCTAAGGCTGGAAAGAATTCCAGATGTTATTGGCATCAATGATGCTCCAAGTGTTGGTGAAGATAATCCTGAAGTTTGGCATGTTCAGatatttcgttcaattgattcaaattccgttaaggggtttccaaaggatccaaaagatgcaacgagcaagaacctagtttgtggaaagaatgtgctgattgacatgagcatacatacagcatatgttaaggccattcgtgctgcacaacattacatttatatagagaatcaatatttcatcggttcttcttacaattggagtcaacataaagacctaggtgctaataacttaatcccaatggaaattgctctaaagattgctgaaaagataaaagcaaacgagagatttgcagtgtatgttgttattccaatgtggccagaaggtgttccaacaggggctgccacacaaaggattctattttggcagaataaaacaatgcaaatgatgtatgagacaatttacaaggctttggttgaggcagggcttgaagctgcattttctccacaagattatttgaactttttctgtcttggtaatcgagaggccatgaatttgtatgataatgccggtgtgactggagctcctcccccagcaaatagtccacaagcagccagccgaaatagccaacgcttcatgatttatgttcattcaaaaggcatgatagttgatgatgaatatgtgatattggggtctgcaaacatcaaccaacgctccatggaaggaacaagggacagtgagattgcaatgggagcttatcaacctcatcatacgtgggcaagaaaacaatcttatccacatggacaaatccatggatataggatgtcactttgggcagaacatacaggaacaattgaagagtgctttttgcaacccgagagccttgaatgtGACTGTGAAGAGTTCCCGGATGTGGGAGGAAAAATAGTTGGATCTTTTCTTGCTATGAAGGAGAACCTAACCATTTGA 3189 0.3161 MDNYGSSSPYRYPSPYMYPPNPHQPYPPPPGSAPDPYAQHVPYQPYPYLSSHSFNYSYPPPPRPSSHSGHFEYSYTPPPHPSDFPYPPPPYYAHPPSYPYPYHVPPPNHDPSKPSLSYHASFQHGSSHYYYQQPNQAYSASAPEVQPDIHSHTNSYSGPYWQENTSTAADEVSQASDSSKPSQGSAYPPLDDLMSNVRLSDGQPTAPASPPAPARQPFMHSISVPKLQQKREEFYGYSNNSFSGWGSSYHSQVDSSRLSDFSGSFNESMHSQSLQIVPVQNKGSLRVLLLHGNLDIWIHEAKNLPNMDMFHKTLGDMFGKLPGSVGNKIEGTMNKKITSDPYVSISVSNAVIGRTYVISNSENPVWLQHFYVPVAYHAAEVHFLVKDNDIVGSQLIGIVAIPVEQIYSGAVVEGTFPILNNNGKPCKQGAVLTLSIQYIPMEKLSIYHQGVGAGPEYIGVPGTYFPLRRGGTVTLYQDAHVPDGSLPNVLLDSGMYYVNGKCWQDIFDSISQARRLIYITGWSVWHKVRLVRDAAGYASDYTLGDLVKSKSQEGVRVLLLIWDDPTSRSIFGYKTDGVMATHDEETRRFFKHSSVQVLLCPRSGKRHSWIKQKEVGTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDTPHHPLFRTLNTIHKDDYHNPTFTGNIGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKPHGIKKLKISYDDALLRLERIPDVIGINDAPSVGEDNPEVWHVQIFRSIDSNSVKGFPKDPKDATSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIKANERFAVYVVIPMWPEGVPTGAATQRILFWQNKTMQMMYETIYKALVEAGLEAAFSPQDYLNFFCLGNREAMNLYDNAGVTGAPPPANSPQAASRNSQRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDSEIAMGAYQPHHTWARKQSYPHGQIHGYRMSLWAEHTGTIEECFLQPESLECDCEEFPDVGGKIVGSFLAMKENLTI 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00843 1062 SUPERFAMILY Phospholipase D/nuclease 496 716 - -
Gma02g00843 1062 SUPERFAMILY Phospholipase D/nuclease 782 1042 - -
Gma02g00843 1062 MobiDBLite consensus disorder prediction 59 79 - -
Gma02g00843 1062 MobiDBLite consensus disorder prediction 138 185 - -
Gma02g00843 1062 SMART C2_3c 293 415 IPR000008 -
Gma02g00843 1062 MobiDBLite consensus disorder prediction 99 120 - -
Gma02g00843 1062 Pfam C2 domain 292 418 IPR000008 -
Gma02g00843 1062 MobiDBLite consensus disorder prediction 13 36 - -
Gma02g00843 1062 Pfam Phospholipase D Active site motif 953 979 IPR001736 GO:0003824
Gma02g00843 1062 Pfam Phospholipase D Active site motif 618 652 IPR001736 GO:0003824
Gma02g00843 1062 PANTHER PHOSPHOLIPASE D ALPHA 1 193 1037 - -
Gma02g00843 1062 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 617 652 IPR001736 GO:0003824
Gma02g00843 1062 MobiDBLite consensus disorder prediction 138 218 - -
Gma02g00843 1062 CDD C2_plant_PLD 287 439 - -
Gma02g00843 1062 Gene3D C2 domain 287 431 IPR035892 -
Gma02g00843 1062 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 290 441 IPR035892 -
Gma02g00843 1062 ProSiteProfiles C2 domain profile. 270 416 IPR000008 -
Gma02g00843 1062 Gene3D Endonuclease Chain A 765 1007 - -
Gma02g00843 1062 MobiDBLite consensus disorder prediction 1 44 - -
Gma02g00843 1062 Gene3D Endonuclease Chain A 495 731 - -
Gma02g00843 1062 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 952 979 IPR001736 GO:0003824
Gma02g00843 1062 PANTHER PHOSPHOLIPASE D 193 1037 IPR015679 -
Gma02g00843 1062 SMART pld_4 617 652 IPR001736 GO:0003824
Gma02g00843 1062 SMART pld_4 952 979 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00843 Gma-Chr2 8425361 8432802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00843 66 1062 Phospholipase D Gene Family (Wang group) AT2G42010 65.863 0.0 1383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00843 K01115 - gmx:100791059 2012.65