Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00838 atgaaccccgtcaacaccgtcttcgATgctaagcgtttgattggaaggagaatttctgatgcctccgttcagagtgatatgaagctatggccatttaaggttatccctggcccagctgacaaacctatgattgtggtcaactacaagggtgaggacaaacagttcgctgctgaggaaatttcttccatggttctcatgaagatgCGTGAGATTGCCGAGGCTTATCTGGGTTCCACCGTGAAGAATGCTGTGGTTACTGTTCCTGCTTACTTCAATGACTCCCAGCGTCAGGCCACAAAGGATGCCGGGGTCATTGCTGGTCTCAATGTCATGCGTATCATCAATGAACCCACTGCTGCTGCCATTGCTTATGGTCTTGACAAGAAGGCCACCAGCGTGGGTGAGAAGAACGTGTTGATTTTTGACTTGGGTGGTGGTACCTTTGATGTCTCTCTTCTCACTATTGAAGAGGGTATTTTTGAGGTCAAGGCCACTGCGGGAGATACCCATCTTGGAGGTGAAGATTTTGATAACAGAATGGTTAACCATTTTGTTCAGGAGTTCAAGAGGAAGCACAAGAAGGATATCAGTGGAAACCCTAGGGCTCTTAGGAGGTTGAGGACTGCCTGTGAAAGGGCGAAGAGGACCCTTTCATCTACTGCACAGACTACAATTGAGATTGATTCTCTTTACGAGGGTGTTGACTTCTACACCACAATCACCCGAGCCAGGTTTGAGGAGCTCAACATGGATCTCTTCAGGAAGTGTATGGAGCCTGTTGAGAAGTGTTTGAGGGATGCCAAGATGGACAAGAGCACTGTCCATGATGTTGTCCTTGTTGGTGGATCCACTAGAATTCCTAAAGTCCAGCAATTGTTGCAAGATTTCTTCAATGGAAAGGAACTTTGCAAGAGCATTAACCCTGATGAGGCCGTTGCTTATGGAGCTGCTGTTCAGGCTGCTATTTTGAGTGGTGAAGGTAACGAGAAGGTGCAGGATCTGTTGCTGTTGGATGTTACACCCCTTTCTCTTGGTTTAGAAACTGCCGGTGGTGTCATGACTGTCCTCATTCCCAGGAACACTACTATCCCCACCAAGAAGGAGCAAGTGTTCTCTACTTACTCAGACAACCAACCTGGTGTCTTGATTCAGGTGTACGAGGGAGAGAGAGCTAGAACCAGGGACAACAATTTGTTGGGAAAATTTGAGCTTTCTGGCATTCCCCCAGCACCCAGGGGTGTTCCTCAGATTACTGTTTGCTTCGATATAGATGCCAATGGTATCTTGAATGTCTCTGCCGAGGACAAGACCACAGGGCAGAAGAATAAGATCACCATTACCAACGACAAGGGTAGACTCTCAAAGGAGGAAATCGAGAAGATGGTCCAGGAAGCAGAAAAATACAAGGCTGAGGATGAGGAGCACAAGAAGAAGGTTGATGCAAAGAATGCATTGGAGAACTACGCCTACAACATGAGGAACACCATTAAAGACGAGAAGATTGCATCAAAGCTCTCTGGTGACGACAAGAAGAAGATCGAAGATGCCATTGAGAGTGCTATTCAGTGGTTGGATGGAAACCAGCTGGCAGAGGCTGATGAGTTCGAAGACAAGATGAAGGAGCTTGAGAGCACTTGCAACCCAATCATTGCTAAGATGTACCAGGGTGCAGGTGCTCCCGACATGGCCGGAGGCATGGATGAAGATGTTCCTCCATCTGGTTCCGGTGGTGCTGGCCCCAAGATCGAGGAAGTTGACTAA 1761 0.4225 MNPVNTVFDAKRLIGRRISDASVQSDMKLWPFKVIPGPADKPMIVVNYKGEDKQFAAEEISSMVLMKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIKDEKIASKLSGDDKKKIEDAIESAIQWLDGNQLAEADEFEDKMKELESTCNPIIAKMYQGAGAPDMAGGMDEDVPPSGSGGAGPKIEEVD 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00838 586 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 328 481 IPR029047 -
Gma02g00838 586 PANTHER HEAT SHOCK PROTEIN 70KDA 1 566 IPR013126 GO:0005524|GO:0140662
Gma02g00838 586 SUPERFAMILY Actin-like ATPase domain 2 128 IPR043129 -
Gma02g00838 586 Gene3D - 8 63 - -
Gma02g00838 586 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 480 561 IPR029048 -
Gma02g00838 586 ProSitePatterns Heat shock hsp70 proteins family signature 2. 140 153 IPR018181 -
Gma02g00838 586 Coils Coil 455 478 - -
Gma02g00838 586 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 329 486 IPR029047 -
Gma02g00838 586 Gene3D Actin; Chain A, domain 4 172 255 - -
Gma02g00838 586 Gene3D - 129 303 - -
Gma02g00838 586 SUPERFAMILY Actin-like ATPase domain 135 325 IPR043129 -
Gma02g00838 586 Gene3D - 482 556 IPR029048 -
Gma02g00838 586 Pfam Hsp70 protein 1 555 IPR013126 GO:0005524|GO:0140662
Gma02g00838 586 Gene3D - 2 321 - -
Gma02g00838 586 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 566 - -
Gma02g00838 586 ProSitePatterns Heat shock hsp70 proteins family signature 3. 277 291 IPR018181 -
Gma02g00838 586 MobiDBLite consensus disorder prediction 558 586 - -
Gma02g00838 586 PRINTS 70kDa heat shock protein signature 83 103 - -
Gma02g00838 586 PRINTS 70kDa heat shock protein signature 146 156 - -
Gma02g00838 586 PRINTS 70kDa heat shock protein signature 274 290 - -
Gma02g00838 586 PRINTS 70kDa heat shock protein signature 306 326 - -
Gma02g00838 586 PRINTS 70kDa heat shock protein signature 333 352 - -
Gma02g00838 586 PRINTS 70kDa heat shock protein signature 414 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00838 Gma-Chr2 8379775 8382142 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00838 1 586 Calmodulin-binding Proteins AT3G12580 93.027 0.0 1103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00838 K03283 - gmx:100789474 1136.32