Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00834 ATGATTGGGGGTTGTTATTTTGCAGATGCCAAGAGGTTGATTGGTAGGAGAGTTAGCGACCCTTCTGTTCATAGTGATATGAAGTTGTGGCCATTTAAGGTTATTGCTGGTGCTGGTGAGAAACCCATGATTGGTGTCAATTACAAGGGTAAGGAAAAGCAATTTTCTACTGAGGAAATCTCCTCTATGGTCCTAACAAAGATGCGGAAGATTGCAGAGGCTTACCTTGGGTCGACTGTGAAGAATGCCTTTGTTACTGTGCCTGCTTACTTCAATGATTCTCAGCGTCAAGCCAGCAAAGATGTTGGTGTCATTACTGGCCTCAATGTTATGAGAATAATAAATGAGCCAACTGTTGTTGCAATTGCATTAGGACTAGACAAGAAAGCCACTAGTGTTGGTGAGAAGAATGTCTTGATCTTTGATCTTGGAGGTGGCACCTTTGATGTTTCTTTCTTCACCATTTTGATAATAGAATGGTTTGAGGAGCTCAACATGAACCTTTTTAGGAAATGTATGGAGCCTGTGGAGAAGTGTCTTAGGGAAGCAAAGATGAGCAAGATCACCGTTCATGATGTTGTCCTCGTTGGTGGCTCTACAAGGATTCCTAAAGTTCAGCAGTTGTTGCAGGACTTCTTCAATGGGAAAGATCTATGCAAGAACATTAACCCCAATGAAGTCGCTGCTTATGGAGTTGCTGTCCAGGCAACTATATTGAGTGGTGAAGGAAATGAGAAGGTTCAAGATTTGTTGCTTTTGGATTTTACCCCATTGTCTTTGGGTTTGGAAACTGCtggagatgtcatgactgtattgattctaaggaatactaccattcctattaaggaggaacaagatttctctacataa 870 0.3851 MIGGCYFADAKRLIGRRVSDPSVHSDMKLWPFKVIAGAGEKPMIGVNYKGKEKQFSTEEISSMVLTKMRKIAEAYLGSTVKNAFVTVPAYFNDSQRQASKDVGVITGLNVMRIINEPTVVAIALGLDKKATSVGEKNVLIFDLGGGTFDVSFFTILIIEWFEELNMNLFRKCMEPVEKCLREAKMSKITVHDVVLVGGSTRIPKVQQLLQDFFNGKDLCKNINPNEVAAYGVAVQATILSGEGNEKVQDLLLLDFTPLSLGLETAGDVMTVLILRNTTIPIKEEQDFST 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00834 289 Gene3D - 6 128 - -
Gma02g00834 289 Pfam Hsp70 protein 160 289 IPR013126 GO:0005524|GO:0140662
Gma02g00834 289 Pfam Hsp70 protein 7 155 IPR013126 GO:0005524|GO:0140662
Gma02g00834 289 Gene3D - 223 236 - -
Gma02g00834 289 PRINTS 70kDa heat shock protein signature 83 103 - -
Gma02g00834 289 PRINTS 70kDa heat shock protein signature 146 156 - -
Gma02g00834 289 Gene3D - 172 222 - -
Gma02g00834 289 Gene3D - 129 155 - -
Gma02g00834 289 Gene3D - 8 63 - -
Gma02g00834 289 ProSitePatterns Heat shock hsp70 proteins family signature 3. 193 207 IPR018181 -
Gma02g00834 289 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 1 8 156 - -
Gma02g00834 289 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 1 161 289 - -
Gma02g00834 289 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 245 289 IPR029047 -
Gma02g00834 289 SUPERFAMILY Actin-like ATPase domain 4 128 IPR043129 -
Gma02g00834 289 SUPERFAMILY Actin-like ATPase domain 134 241 IPR043129 -
Gma02g00834 289 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 237 289 IPR029047 -
Gma02g00834 289 PANTHER HEAT SHOCK PROTEIN 70KDA 8 156 IPR013126 GO:0005524|GO:0140662
Gma02g00834 289 PANTHER HEAT SHOCK PROTEIN 70KDA 161 289 IPR013126 GO:0005524|GO:0140662
Gma02g00834 289 Gene3D Actin; Chain A, domain 4 161 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00834 Gma-Chr2 8348874 8349934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00834 150 247 Calmodulin-binding Proteins AT5G02500 76.531 1.67e-48 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00834 K03283 K09490 nnu:104594972 390.193