Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00805 ATGATGAAATCAGAGCCCGGAGTTCAGCAGATGATCAGTTCTGAAATCCCCATGCTGATGTCAAAAGCATGTGAGATTTTCATTCAGGAGCTCACTTTTCGTGCTTGGATGCATGCTGAAAAGAACAACAAGAGTATTGTGCAGCCTTGTGACGTTGCCAAAGTTATCATGCAAACTGATACCATGAATTTCCTCACTGAGATTATTCCAAACAACCTCGGCGATTTCAGTGTTTTTGATGCCAAGgaagagaatgctggaaacattgtggaaggaaaccaagctaccttaccttacacctctggttttatgggaaatcctatgaatatgatgaatatggacaatGACTTGGAGGCAGGAAACCAACTGATTCCTCAACCAAACATGATGCAGCCACCCTTTATGCCTTCAGATCAATTGCCTTACAATTTTCAACCCAATTGA 444 0.3311 MMKSEPGVQQMISSEIPMLMSKACEIFIQELTFRAWMHAEKNNKSIVQPCDVAKVIMQTDTMNFLTEIIPNNLGDFSVFDAKEENAGNIVEGNQATLPYTSGFMGNPMNMMNMDNDLEAGNQLIPQPNMMQPPFMPSDQLPYNFQPN 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00805 147 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 2 115 - -
Gma02g00805 147 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA 2 115 IPR027170 GO:0003700|GO:0006355|GO:0016602
Gma02g00805 147 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 55 IPR003958 -
Gma02g00805 147 Gene3D Histone, subunit A 1 71 IPR009072 GO:0046982
Gma02g00805 147 SUPERFAMILY Histone-fold 2 71 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00805 Gma-Chr2 7962787 7966149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00805 1 133 CCAAT-HAP5 Transcription Factor Family AT3G48590 35.664 6.46e-21 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Gma02g00805 CBFD_NFYB_HMF 5.5e-08 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00805 - K08066 gsj:114370134 160.999