Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00790 ATGAAATCAGAGAAAATGAAAGGGCAGAGTAGAGAATTTCTTGAGTCCGGTTCCTCATCGGTGGTCTCAAACGCGGTTCAGCAGCGCCTCCAATTCATTCTGCAGAGCCGTCCCGAGTGGTGGGTATATGCCATCTTCTGGCAAGCCACGAAAGACAGTGATTCGCGTCTCAAATTAGAATATGGCGACGGCTACTTTCGGGGCAAAGAGGAGAAGGAAGAGGAACAAACGAGGAACGTGAACGACATCGAATGGTTCTACAGAATGTCGCAAACTCGGTCGTATGTTGCCGGGGACGGTGTGGTTGGGTGTGCCTACAGCTCAGGGGTAGATGTTTGGTTGAGCGGAGTGAACGAGTTTGAACTGAATGACTGTGACGACAGAGTAAGGGAAGCTCGTAGTCACGGGATCCACACATTGGTCTGCGTCTATGTGCCAGGTGGCATCCTTGAGCTGGGTTCGTGTCACGTCTTCACTCTCGGATACGGCCTTCTGGAAATGGCGAAATCAGTGTTTGAGGAAAGTCAGAATCAGAATCCACTTAACAACCCCATGGGCATGAATGATGCAACTGCTGCTAAGGTTGATGGATCGTCCACAGACTCTTCTGATGCGGATGCGGATGCTACTTTCCCGATGACGAGAAGGGGAGGAGGGAGGGCACGTGAGGCGCTGCCTATGAATCACGTGGAAGCTGAGAGGCAACGGCGAGAGAAGCTGAACCAGCGATTCTACACTCTTCGCTCAGCGGTCCCCAACGTGTCCAAGATGGACAAAGCCTCTCTGCTTTTGGACGCTGTTGACTACATCAATGAACTCAAGGCCAAGATCAATCACCTGGAGAGCAGTGCCAACAGGCCCAAGCAGGCCCAAGTCATTCATTCCTCCACCTCTGCAAGTTCCAACATGAGAGTCGAAGTAAAGATCTTGGGTGCCGAGGCCATGATAATGGTCCAGAGCCTAAACCTGAACCACCCCCCTGCAAGGTTAATGGATGCTCTCAGGGACCTCAATTTGCAAATTCTCCATGCCACAATGTCCAACATCAAAGAGATGATGCTGCAAGACGTCGTCGTCAAAGTTCCGCATGACCTCATGACCCAAGACGCGCTCCAAAATGCCATTCTTCACAGACTCTGA 1140 0.514 MKSEKMKGQSREFLESGSSSVVSNAVQQRLQFILQSRPEWWVYAIFWQATKDSDSRLKLEYGDGYFRGKEEKEEEQTRNVNDIEWFYRMSQTRSYVAGDGVVGCAYSSGVDVWLSGVNEFELNDCDDRVREARSHGIHTLVCVYVPGGILELGSCHVFTLGYGLLEMAKSVFEESQNQNPLNNPMGMNDATAAKVDGSSTDSSDADADATFPMTRRGGGRAREALPMNHVEAERQRREKLNQRFYTLRSAVPNVSKMDKASLLLDAVDYINELKAKINHLESSANRPKQAQVIHSSTSASSNMRVEVKILGAEAMIMVQSLNLNHPPARLMDALRDLNLQILHATMSNIKEMMLQDVVVKVPHDLMTQDALQNAILHRL 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00790 379 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 73 172 IPR025610 -
Gma02g00790 379 PANTHER MYC 21 379 IPR045084 GO:0003700|GO:0006355
Gma02g00790 379 Pfam Helix-loop-helix DNA-binding domain 228 273 IPR011598 GO:0046983
Gma02g00790 379 MobiDBLite consensus disorder prediction 194 219 - -
Gma02g00790 379 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 226 294 IPR036638 GO:0046983
Gma02g00790 379 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 224 273 IPR011598 GO:0046983
Gma02g00790 379 SMART finulus 230 279 IPR011598 GO:0046983
Gma02g00790 379 Gene3D - 220 290 IPR036638 GO:0046983
Gma02g00790 379 PANTHER TRANSCRIPTION FACTOR MYC2-LIKE 21 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00790 Gma-Chr2 7776105 7777442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00790 18 379 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00870 33.750 1.23e-57 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma02g00790 bHLH-MYC_N 3.7e-18 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00790 - K13422 gmx:100777730 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01515 07 21432589 21434794 Gma02g00790 02 7776105 7777442 GST