Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00778 ATGTATCTTGGTTGGTATCTTTTGACATTTTTCTTTTTTTTGACGAGTGTTAAAATAGTGTTAGTGCATGCTAATCACAATCATCATCACCATCATCATCACGAACAAAGAAACAATAAACAAATTGCAAACAAAACATCCCATTCTTCTTCCGGGACAATTATTGTGGACTTATCGGGGAATGGAGACTTCTCTACGATACAATCTGCTATTGATTCAATTTCTTCTGACAACAAGAATTGGGTTTATATCTATGTGAAGGCAGGCACCTACAGGGAAAAGGTGAAGATCAGTTTTGACAAGCCTTTCATCGTACTAGAAGGCGAGGGACAAAAGAACACTTTTGTTGAGTGGGATGACCATGATTCAAGTGCAGAGAGTCCTACGTTCACAACCATGGCTGACAATGTTGTCGTCAAGTCCATTAGCTTTAGGACACTCTGTGGGATGAACAAGGAAGACATTACTTCAAGTCTTGTACAATTCAAGGACTGTACCATATCCGCTATTGATGCTAATCTTGGTCCTGGCATTATTGGTTTTATCACCGCACAAGGGAGAACAGATCCAAACGATTCAAATGGGTTTGTTTTTAAGCAATGCAATATCATTGGAAATGGTACAACTTACTTGGGAAGACCATGGAGAGGTTATGCTAGAGTTATTTTCTATAATACTAAAATGTCCAACATTATACAACCATTAGGTTGGCAGCCATGGGGCTTCGCTGGCCAAGAGGATCACATAACATTCGCTGAGTATGGGAATTCTGGACCTGGTTCTGACACTTCCAAGCGAGTAAGTTGGTTAAAGAATTTGGATTCATCAACCGTTAGTAAGATGGCAAGTACTAGCTTCATTGGCACCGATGGTTGGCTAAAGACCCTGACGCAGCTCTAA 900 0.4033 MYLGWYLLTFFFFLTSVKIVLVHANHNHHHHHHHEQRNNKQIANKTSHSSSGTIIVDLSGNGDFSTIQSAIDSISSDNKNWVYIYVKAGTYREKVKISFDKPFIVLEGEGQKNTFVEWDDHDSSAESPTFTTMADNVVVKSISFRTLCGMNKEDITSSLVQFKDCTISAIDANLGPGIIGFITAQGRTDPNDSNGFVFKQCNIIGNGTTYLGRPWRGYARVIFYNTKMSNIIQPLGWQPWGFAGQEDHITFAEYGNSGPGSDTSKRVSWLKNLDSSTVSKMASTSFIGTDGWLKTLTQL 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00778 299 Gene3D - 156 298 IPR012334 -
Gma02g00778 299 Gene3D - 47 155 IPR012334 -
Gma02g00778 299 SUPERFAMILY Pectin lyase-like 49 295 IPR011050 -
Gma02g00778 299 ProSitePatterns Pectinesterase signature 1. 78 97 IPR018040 -
Gma02g00778 299 PANTHER PECTINESTERASE 10-RELATED 162 296 - -
Gma02g00778 299 PANTHER PECTINESTERASE 10-RELATED 33 153 - -
Gma02g00778 299 Pfam Pectinesterase 54 154 IPR000070 GO:0030599|GO:0042545
Gma02g00778 299 Pfam Pectinesterase 159 288 IPR000070 GO:0030599|GO:0042545
Gma02g00778 299 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 162 296 - -
Gma02g00778 299 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 33 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00778 Gma-Chr2 7596005 7598845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00778 54 294 Carbohydrate Esterase AT1G05310 29.766 6.44e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00778 - - gmx:100818719 551.592