Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00754 ATGCATAATAATTTTGCTCGTGATGATGACCGTACCGGTCACCGAATGCTAAAGGACACAAAAACAATTGGATCTGCTTATGACCGCTACCTTCAGAGTGGGCAACTTTCTTCATTTACTTCTGGGGAAGCCAGTACAGTTGGGGGTCTTGGGTTGGCTAGGGGTGGTGGTGGATTATCAGACCATTCACTAGCTGATCCTTCTGTCATGGGGCGTCATGGGGGTGGTGGTCCAGATCTAGCACCAAATGGACGGGGTGTTAACTATGGTGGTCAGCTACCTGTAGATGCAGTTTCCAGACCTGGACCTGAGACAGTACCTCTACCTCCAGATGCTTCAAGTACTCTATATGTTGAAGGTCTCCCTTCTGATAGCACCAGAAGGGAAGTAGCTCATATTTTTCGCCCTTTTGTTGGGTATAGAGAAGTTAGACTTGTGAGCAAAGAATCCAAACATCGTGGTGGAGATCCTCATTACCTTTGTTTTGTGGACTTTGCAAATCCAGCTTGTGCAGCAACTGCTATGAGTGCCTTGCAAGGTTATAAAGTTGATGAACTCAATCCTGAATCTAGTCACTTGCGGCTTCAGTTTTCTCGGTATCCTGGTCCAAGAAGTGGACCTGCTTTTCGTGGTAAAAGATGA 642 0.4642 MHNNFARDDDRTGHRMLKDTKTIGSAYDRYLQSGQLSSFTSGEASTVGGLGLARGGGGLSDHSLADPSVMGRHGGGGPDLAPNGRGVNYGGQLPVDAVSRPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFVGYREVRLVSKESKHRGGDPHYLCFVDFANPACAATAMSALQGYKVDELNPESSHLRLQFSRYPGPRSGPAFRGKR 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00754 213 PANTHER RNA-BINDING PROTEIN 2 1 213 - -
Gma02g00754 213 CDD RRM_RBPMS_like 114 196 - -
Gma02g00754 213 Gene3D - 110 200 IPR012677 -
Gma02g00754 213 MobiDBLite consensus disorder prediction 58 87 - -
Gma02g00754 213 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 116 184 IPR000504 GO:0003723
Gma02g00754 213 SUPERFAMILY RNA-binding domain, RBD 90 205 IPR035979 GO:0003676
Gma02g00754 213 SMART rrm1_1 115 189 IPR000504 GO:0003723
Gma02g00754 213 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B 1 213 - -
Gma02g00754 213 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 114 200 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00754 Gma-Chr2 7342137 7346017 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00754 - - gmx:100815695 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01507 16 34664332 34671787 Gma02g00754 02 7342137 7346017 GST
Gma02g00754 02 7342137 7346017 Gma10g02160 10 49138114 49143855 PCT
Gma02g00754 02 7342137 7346017 Gma20g01556 20 42567633 42572948 PCT
Gma10g02160 10 49138114 49143855 Gma02g00754 02 7342137 7346017 PCT
Gma20g01556 20 42567633 42572948 Gma02g00754 02 7342137 7346017 PCT