Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00738 ATGTTGGGGGACTCAGCAGTGTTGGGAACAGGAGGAGGAGGCTCTGGTGATGCAGTGGCAGCACCACCGGTTGTTGGTGGTGGTGCTGCTGCATCAGGAGGAGCACATGAAGGCGGTGCCAACGGCGGCGGCGGATCAAATTCAGGGGATGATAGAGTTGAGGAAGGTGACAAGAGCTTTGGTGGGAACAGGTGGCCAAGACAAGAGACTTTGGCTTTGTTGAAGATACGGTCGGATATGGACGTGGCTTTTAGAGACGCAAGTGTAAAGGGTCCCTTGTGGGAAGAGGTTTCTAGGAAACTGGCAGAGCTTGGCTACCACAGAAATGCCAAGAAGTGCAAAGAGAAGTTTGAGAACGTTTACAAGTACCACAAGAGAACCAAAGAAGGTCGAAGTGGGAAATCAGAAGGCAAAACTTATCGCTTCTTTGATCAATTACAAGCCCTTGAAAACAACCCTTCAATCCATGCTATGCAATCCCCAACACCAACACCTTCAAAGCCACCACAAACAACAGCACTACTTGCAACACCAGTGTCAATAGTGGTAACAACAACTACTACACCATCAACATTAGTGTCTAATAATGCCACTGTTCCATCCACAAATACACCCCCTTTGCCTCAAGCCATTCTCAACATAACACCACCATCAACACTAAACATCACAACCCCTTCTTTTCCATCATCAAACCCTACAACATACTTCCCAACACAAACACCAAACCCTACAACCAACAACAACCCTCCAAACACCATCACCCCAGCTTCCTTCCCCAACTTCTCCGCAGATCTCTTGTCGAATTCGAGTTTTTCATCGACTTCGTCGGAGGAAACAACGACGATGGGGGGAGGGGGAATGAGGCGCAAGAGGAAGAGGAAGTGGAAGGACTTCTTTGAGAGGCTGATGAAGGAGGTGATAGAGAAGCAGGAGGGGCTGCAAAGGAGGTTCTTGGAGGCCATTGAGAAAAGAGAACAAGAGCGTGTGGTGAGAGAGGAAGCGTGGAGAATGCAAGAGATGCAAAGGATCAACAGGGAAAGGGAGATTCTAGCACAGGAGAGGTCCATTGCTGCAGCAAAAGATGCTGCTGTTATGACATTTTTGCAAAAGATAGCCGAACATCAGCAACAAGAAATCAATCTTGAGCCAGCATTGAATAACAACAACAACAGCATCACTGTCGTTCCACAGCAACCAGTGCCACAAACAACTACAACACCAACACCAACACCACAACAAGCACAAACAACAATAGTTCCTGAGGCCCCACAACCACAACAACAAATAGTGGTGAGTAATGTTGAAAACAATAAAGCTGACAATAACGGTGAGAATTTGACGATGGGAGCGAGCTCTTCAAGGTGGCCAAAAATGGAGGTACAGGCACTGATAAACCTAAGAACAAGCCTGGAAACAAAGTACCAGGAAAATGGACCAAAAGGGCCACTGTGGGAGGAGATCTCAGCGTTGATGAGGAAAATGGGGTACAACCGGAATGCCAAAAGGTGCAAAGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAGGTCAAGGAAAGCAGCAAGAAGAGGCCAGAAGATTCCAAGACTTGTCCCTATTTTCACCAGTTGGAGGCTCTATACAGGGAGAAGAACAAGAGAGAGGGGCAGATGAAGCCGGATAGCATGATGGCGCCGCTCATGGTGCAGCCTGAGCAACAATGGCCTCCTCAAACGCACGTGGTGCCGCCAGAAGTGACCATGGGAGACGCCCAGAATGACCCCATGGACCGGCGGCACGAGGAAGTTGAGGAGGACGAAGCCGACAAGGAAATTGGAGATGAAGACGAGGACGAGGACGACGAAGGAAGTGATAATTATGAGATAGTAGCTAGCAAACCAGCTTCTGGAGAGGCCCTTCCAGTAGCAGAAAATGCCAGCATCACACATGGAGTCATAAACCCTTGA 1947 0.4848 MLGDSAVLGTGGGGSGDAVAAPPVVGGGAAASGGAHEGGANGGGGSNSGDDRVEEGDKSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWEEVSRKLAELGYHRNAKKCKEKFENVYKYHKRTKEGRSGKSEGKTYRFFDQLQALENNPSIHAMQSPTPTPSKPPQTTALLATPVSIVVTTTTTPSTLVSNNATVPSTNTPPLPQAILNITPPSTLNITTPSFPSSNPTTYFPTQTPNPTTNNNPPNTITPASFPNFSADLLSNSSFSSTSSEETTTMGGGGMRRKRKRKWKDFFERLMKEVIEKQEGLQRRFLEAIEKREQERVVREEAWRMQEMQRINREREILAQERSIAAAKDAAVMTFLQKIAEHQQQEINLEPALNNNNNSITVVPQQPVPQTTTTPTPTPQQAQTTIVPEAPQPQQQIVVSNVENNKADNNGENLTMGASSSRWPKMEVQALINLRTSLETKYQENGPKGPLWEEISALMRKMGYNRNAKRCKEKWENINKYFKKVKESSKKRPEDSKTCPYFHQLEALYREKNKREGQMKPDSMMAPLMVQPEQQWPPQTHVVPPEVTMGDAQNDPMDRRHEEVEEDEADKEIGDEDEDEDDEGSDNYEIVASKPASGEALPVAENASITHGVINP 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00738 648 SMART sant 61 123 IPR001005 -
Gma02g00738 648 SMART sant 451 513 IPR001005 -
Gma02g00738 648 PANTHER - 1 626 - -
Gma02g00738 648 MobiDBLite consensus disorder prediction 585 599 - -
Gma02g00738 648 ProSiteProfiles Myb-like domain profile. 57 121 IPR001005 -
Gma02g00738 648 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 626 - -
Gma02g00738 648 MobiDBLite consensus disorder prediction 600 618 - -
Gma02g00738 648 MobiDBLite consensus disorder prediction 570 648 - -
Gma02g00738 648 MobiDBLite consensus disorder prediction 268 282 - -
Gma02g00738 648 Pfam Myb/SANT-like DNA-binding domain 63 149 IPR044822 -
Gma02g00738 648 Pfam Myb/SANT-like DNA-binding domain 453 540 IPR044822 -
Gma02g00738 648 MobiDBLite consensus disorder prediction 1 64 - -
Gma02g00738 648 MobiDBLite consensus disorder prediction 268 289 - -
Gma02g00738 648 CDD GT1 453 518 - -
Gma02g00738 648 ProSiteProfiles Myb-like domain profile. 447 511 IPR001005 -
Gma02g00738 648 CDD GT1 63 128 - -
Gma02g00738 648 Gene3D - 65 126 - -
Gma02g00738 648 Gene3D - 455 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00738 Gma-Chr2 7161592 7165566 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00738 54 568 Trihelix Transcription Factor Family AT1G76880 55.866 1.02e-169 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma02g00738 Myb_DNA-bind_4 1.6e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00738 - - gmx:547624 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01495 16 34356242 34359871 Gma02g00738 02 7161592 7165566 GST
Gma02g00738 02 7161592 7165566 Gma10g02149 10 49002159 49004993 PCT
Gma02g00738 02 7161592 7165566 Gma20g01565 20 42700743 42703665 PCT
Gma10g02149 10 49002159 49004993 Gma02g00738 02 7161592 7165566 PCT
Gma20g01565 20 42700743 42703665 Gma02g00738 02 7161592 7165566 PCT