Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00722 ATGTCCTTGCTAACGGTGGCGCACCAAAGGGGGTCAGGTGAGTTTATGCGGTTCACGGAAAGTCATGGCGGCGGTGGTGGCGGTGACGGCGATGGTGAATATGGTTATGGACATGATGATGGTAGAGGTGGTGGGGGTGGTGGTTCACTAGGGTTGAATTTTAACCAAGTGATGCAACAAGGTGAGGTTACAACGCAAGGAGGTACTTTGGTTTCAGGGTATAACAGGGGTGATCCAGATTTGAGAGAAATGGTTTCCGCTTTGACACATGTGGTGGTGTCTTCAGGGTCAGGCCAGAGGAGCACCGAATGGATCCAGCAAAGTGGTTTTCCTATGATGTCTGCATCTTCTCTTTCATGTTTGTCTTCTTTCTCTTCTCCTTCTTCTTCTGGAGCCTCTTGGGTTGGCCACAAAAGAGGCAGAGAAGAAGAAGAGAGTAGCTCTTCCCATAACATGATCCAACAACAACAACAAAGTGCTCCAAGACTCTTCAGAAACATTGGTGACTTCATGGTGCCTTCTCAAGGAGACTCATCTTCAGCGACAGAAGAAGCCCCCACCTCCACAACTACAAGTGTAACCGCTGTGGCAACAACGGTTACTGAAACCCCACCCCCACCGGGAGGTGGGGAAAGGAGGAGAAAGTACAGGGGAGTGAGGCAGAGGCCATGGGGAAAATGGGCAGCAGAAATTCGTGATCCACACAAAGCAGCAAGAGTTTGGCTTGGAACATTCGACACAGAAGAAGCAGCAGCAAGAGCATATGATGAAGCTGCATTGAGGTTCAGAGGCAACAGAGCAAAGCTTAACTTCCCTGAAAATGTAAGAGCAGTTCCACCCATTCAACCTTTTCAAGCCACCACTAGGCTAACCGTTTCTGATTCCACCACCTCTCAATTCCGGCCACTCGTCACGGAGGCGCCGCCCTTCATTCAACAGCCACAGATTCAGGGCTCCTCTGACTTGATCAGAGATTACTTGCAATACTCTCAGCTTCTACAGAGTGATTTTCAACAGCAACAAATACAACAACAATCACCTTCTAGTTTGCTTCAGCAGTTGTACTATAATGCACAATTGGCTTCACTTCAATCACCTTCAGTGCTATCATCATCTCCTTCATTTTCTTCTTCCGTGTCACCAACACCATTCCCATTGTTCTCAACCTCTGCTCAGTTTTCCTCTGCTTCTTTCCCCATGTTTTCAAGTCAACAAATGGGCTATTTCCAGCTGCCGGAAAGCTGCCCTCCCGCTGGCGGCGTGCCAGAGTTTCCGCCGTCCACATGGTCGGGTACCAGTGGCCAGCCACCACCTTCTGGTTGA 1323 0.4936 MSLLTVAHQRGSGEFMRFTESHGGGGGGDGDGEYGYGHDDGRGGGGGGSLGLNFNQVMQQGEVTTQGGTLVSGYNRGDPDLREMVSALTHVVVSSGSGQRSTEWIQQSGFPMMSASSLSCLSSFSSPSSSGASWVGHKRGREEEESSSSHNMIQQQQQSAPRLFRNIGDFMVPSQGDSSSATEEAPTSTTTSVTAVATTVTETPPPPGGGERRRKYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTEEAAARAYDEAALRFRGNRAKLNFPENVRAVPPIQPFQATTRLTVSDSTTSQFRPLVTEAPPFIQQPQIQGSSDLIRDYLQYSQLLQSDFQQQQIQQQSPSSLLQQLYYNAQLASLQSPSVLSSSPSFSSSVSPTPFPLFSTSAQFSSASFPMFSSQQMGYFQLPESCPPAGGVPEFPPSTWSGTSGQPPPSG 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00722 440 MobiDBLite consensus disorder prediction 417 440 - -
Gma02g00722 440 MobiDBLite consensus disorder prediction 172 220 - -
Gma02g00722 440 Gene3D AP2/ERF domain 214 274 IPR036955 GO:0003700|GO:0006355
Gma02g00722 440 PRINTS Ethylene responsive element binding protein signature 216 227 IPR001471 GO:0003700|GO:0006355
Gma02g00722 440 PRINTS Ethylene responsive element binding protein signature 238 254 IPR001471 GO:0003700|GO:0006355
Gma02g00722 440 MobiDBLite consensus disorder prediction 172 201 - -
Gma02g00722 440 MobiDBLite consensus disorder prediction 127 158 - -
Gma02g00722 440 MobiDBLite consensus disorder prediction 426 440 - -
Gma02g00722 440 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 82 405 - -
Gma02g00722 440 PANTHER DNA-BINDING DOMAIN 82 405 IPR044808 GO:0003700|GO:0009873
Gma02g00722 440 SMART rav1_2 215 278 IPR001471 GO:0003700|GO:0006355
Gma02g00722 440 CDD AP2 215 274 IPR001471 GO:0003700|GO:0006355
Gma02g00722 440 SUPERFAMILY DNA-binding domain 215 273 IPR016177 GO:0003677
Gma02g00722 440 ProSiteProfiles AP2/ERF domain profile. 215 272 IPR001471 GO:0003700|GO:0006355
Gma02g00722 440 Pfam AP2 domain 215 264 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00722 Gma-Chr2 6952675 6954960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00722 212 279 AP2-EREBP Transcription Factor Family AT2G33710 77.941 6.01e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma02g00722 AP2 3.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00722 - - gmx:100804843 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01476 16 34013840 34016131 Gma02g00722 02 6952675 6954960 GST
Gma16g00430 16 4586155 4590176 Gma02g00722 02 6952675 6954960 PCT
Gma02g00722 02 6952675 6954960 Gma10g02135 10 48834682 48836248 PCT
Gma02g00722 02 6952675 6954960 Gma20g01580 20 42887819 42889147 PCT
Gma10g02135 10 48834682 48836248 Gma02g00722 02 6952675 6954960 PCT
Gma20g01580 20 42887819 42889147 Gma02g00722 02 6952675 6954960 PCT