Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00690 ATGGAGAGAGAGTTGTGGGGTTCTGTTTTCATCTATTGGGTGTTATTAGCTCGCCCATTATGGTTGGTTTCTGCTAACATGGAAGGTGACGCCTTACATAGCCTGAGGACAAATTTACAGGATCCTAACAATGTTTTGCAAAGTTGGGACCCTACACTGGTCAATCCATGCACATGGTTTCATGTAACATGCAACAATGATAATAGTGTCATAAGAGTTGATCTGGGAAATGCTGTTTTGTCTGGTCAACTTGTTCCACAGCTTGGTCAGCTCAAAAACTTACAGTATTTAGAACTTTACAGCAATAACATTAGTGGACCAATTCCAAATGACCTGGGGAATCTTACTAATTTGGTGAGCTTGGATCTGTATCTAAACCGTTTCAGTGGACCTATCCCAGAGTCATTGGGCAAGTTGTCAAAATTGCGCTTTCTCCGGCTTAACAACAACAGCCTGACTGGTCCTATTCCCATGCCACTGACTAATATTACAGCTCTCCAAGTGCTGGATTTGTCTAACAACCAACTATCAGGTGTGGTTCCCGATAATGGCTCCTTCTCATTATTCACTCCTATCAGTTTTAACAACAACTTGGACCTATGTGGCCCAGTCACTGGGCATCCTTGTCCCGGGTCTCCTCCATTTTCTCCTCCTCCCCCTTTTGTCCCACCATCCCCAATCTCAGCTCCAGAAGGAAATAGTGCCACTGGTGCAATAGCTGGAGGAGTAGCTGCAGGTGCTGCTCTGTTATTTGCTGCTCCTGCAATTGTGTTTGCTTGGTGGCGTCGAAGGAAACCACAGGAGTTTTTCTTTGATGTGCCCGCTGAAGAGGATCCTGAAGTACACCTTGGGCAGCTTAAGAGGTTCTCATTACGAGAACTGCAAGTTGCAACAGATACTTTCAGCAATAAGAACATTCTTGGAAGGGGAGGATTTGGTAAGGTTTACAAAGGACGTTTGACTGATGGTTCACTGGTTGCTGTGAAAAGATTGAAAGAGGAGCGCACGCCTGGTGGGGAGCTTCAGTTTCAGACTGAAGTAGAGATGATTAGCATGGCTGTGCACCGAAATCTCCTCCGTTTACGTGGGTTCTGTATGACTCCTACTGAAAGGCTACTTGTATATCCTTACATGGCTAATGGTAGTGTTGCCTCATGCTTAAGAGAGCGTCCGGCACATCAACAACCCCTTGATTGGCCGACAAGGAAAAGAATAGCATTGGGATCAGCAAGGGGTCTTTCATATTTGCATGATCATTGTGACCCAAAGATTATTCATCGTGATGTAAAAGCTGCAAACATACTGTTGGACGAGGAGTTTGAGGCTGTTGTTGGAGATTTTGGGTTGGCTAAACTGATGGACTACAAGGACACCCATGTTACAACTGCTGTACGGGGCACAATTGGGCACATAGCACCAGAGTACCTGTctactggtaaatcttcagagaaaacagacgtctttgggtatggtataatgcttctggagctaatcactggacaaagggcttttgaCTTGGCTCGACTTGCAAATGATGATGATGTTATGTTGCTGGATTGGGTAAAAGGACTTCTGAAAGAAAAGAAGCTAGAAATGCTGGTTGATCCTGATCTCCATAGCAATTACATAGATGCTGAGGTAGAACAGTTAATCCAGGTTGCACTGCTTTGCTCACAAGGTTCCCCTATGGACCGGCCTAAGATGTCAGAAGTGGTGCGAATGCTTGAAGGTGATGGCTTGGCAGAAAGATGGGATGAGTGGCAAAAGGTGGAAGTTCTGCGCCAGGAAGTGGAGTTGGCCCCTCATCCCAATTCCGATTGGATTGTTGACTCAACTGAAAATCTACATGCAGTTGAGTTATCTGGTCCAAGGTGA 1875 0.4347 MERELWGSVFIYWVLLARPLWLVSANMEGDALHSLRTNLQDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAVLSGQLVPQLGQLKNLQYLELYSNNISGPIPNDLGNLTNLVSLDLYLNRFSGPIPESLGKLSKLRFLRLNNNSLTGPIPMPLTNITALQVLDLSNNQLSGVVPDNGSFSLFTPISFNNNLDLCGPVTGHPCPGSPPFSPPPPFVPPSPISAPEGNSATGAIAGGVAAGAALLFAAPAIVFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDTFSNKNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPAHQQPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLHSNYIDAEVEQLIQVALLCSQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEVLRQEVELAPHPNSDWIVDSTENLHAVELSGPR 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00690 624 Gene3D Ribonuclease Inhibitor 24 211 IPR032675 -
Gma02g00690 624 PANTHER LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED 14 624 IPR031048 GO:0004675|GO:0005102|GO:0006468
Gma02g00690 624 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 624 - -
Gma02g00690 624 Gene3D Phosphorylase Kinase; domain 1 270 377 - -
Gma02g00690 624 Gene3D Transferase(Phosphotransferase) domain 1 378 595 - -
Gma02g00690 624 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Gma02g00690 624 ProSiteProfiles Protein kinase domain profile. 301 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g00690 624 Pfam Protein kinase domain 302 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g00690 624 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Gma02g00690 624 SUPERFAMILY L domain-like 29 192 - -
Gma02g00690 624 Pfam Leucine Rich Repeat 93 115 IPR001611 GO:0005515
Gma02g00690 624 SUPERFAMILY Protein kinase-like (PK-like) 280 576 IPR011009 -
Gma02g00690 624 SMART serkin_6 301 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g00690 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00690 Gma-Chr2 6684726 6691224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00690 9 624 Receptor kinase-like Gene Family AT1G71830 88.853 0.0 1041
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Gma02g00690 Pkinase 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00690 K13418 - gmx:100813918 1188.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00690 02 6684726 6691224 Gma02g00690 02 6684726 6691224 ECH
Gma02g00690 02 6684726 6691224 Gma10g02095 10 48477263 48484257 PCT
Gma02g00690 02 6684726 6691224 Gma20g01622 20 43297983 43304474 PCT
Gma10g02095 10 48477263 48484257 Gma02g00690 02 6684726 6691224 PCT
Gma20g01622 20 43297983 43304474 Gma02g00690 02 6684726 6691224 PCT