Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00658 ATGGAAATTCAATTCCAGCATCCAAAGAAGCACTTGAGAGCAAGCACATCAAAAGGAGGCAAAGGGAGAAACAACAACAACAAAACCAAAAGCAAGTATGTTGGGGTGAGGCAAAGAGCATCAGGGAAATGGGTTGCTGAGATCAAAGACACAACACAAAAGATAAGAATGTGGCTTGGCACATATGAGACAGCAGAGGAAGCAGCAAGGGCTTATGATGAAGCTGCATGCCTCCTTCGTGGATCCAACACTCGCACCAACTTCATCACACGTGTGTCCCTTGATTCCCCTCTCGCTTCGCGGATTCAGAATCTTGTCAACAACAGAAAAGGTACCAAAACCAAACAAGAACAATATGTCGTGGAAACATGTGACACAAGGATCAAGAGCAACCGACATGAGTCGATCGCTCTACCAGAAGGAGCTAGTCCTCCACAACGTGGTGAACTAAGGTCTGaatcttcgttggaagacgtgtccaaatttagtatccaacaactgtatattgatcaggattgtctCCGAAAGAAAATACGTGTGGGAAATGAGAAGAAAAGAAGGGTCAATAGCACCACTTGTAGTACTAGTAATAGTACTAATTCAAGCAATAATAGTGACTCATGTGAGAACTCACTTTCTAGTGAGACAACAACACAAAACACACAACAATTTGATGATGATGCTTATAGACCTGATTTGAGCAATTTCATGGTGTCCGAGTCAGGTTCTCATCAGAACAATCCTTCATGGGGTTTTGAACCTTCTTTTAGCCAAGTAATGGATGTAGCAAACCTGCCTGATATAGCTGGCTTGGAGCTTCCAGATTTTGAAAGGATAAAAGTTGAAAGGCAAATATCAGCTTCACTTTATGCAATTAATGGTGGGCATGAACTCAGCAAGACTACTGGGAATGCAGGTGCAAGATTAGCATGTGCTTCGTTCCCAACCCTCTCGACCCATCATCCTTCCTCTACCTTCTTCTCCTTCAACCTTCATCTCCCAAAACACCACCACGCAGCACCACCTACCTCCAAACTCCATCATCAATGCATCAAACGGCTAACACCCCACCTCCAAACACCACACCATAACCCAAACAACCACACTGCCTTGTCCTCCACAACCACAAGCGCAAACTCCGGCGACCCAACCTCCACCAACAAAACGCCGCGCACCGCCACCTATCACCACCGCGACCCAACCTTCAGAGATTTCATTCCCTTTTGGTTAGGTTTCATCGTGTCCTGTTTCGATTGTTGGCAGCAAGGTCGACACCGGAAAAGGAGGTGGTTCGACAGTCAAGTGGAGGGTGGTTGA 1317 0.4389 MEIQFQHPKKHLRASTSKGGKGRNNNNKTKSKYVGVRQRASGKWVAEIKDTTQKIRMWLGTYETAEEAARAYDEAACLLRGSNTRTNFITRVSLDSPLASRIQNLVNNRKGTKTKQEQYVVETCDTRIKSNRHESIALPEGASPPQRGELRSESSLEDVSKFSIQQLYIDQDCLRKKIRVGNEKKRRVNSTTCSTSNSTNSSNNSDSCENSLSSETTTQNTQQFDDDAYRPDLSNFMVSESGSHQNNPSWGFEPSFSQVMDVANLPDIAGLELPDFERIKVERQISASLYAINGGHELSKTTGNAGARLACASFPTLSTHHPSSTFFSFNLHLPKHHHAAPPTSKLHHQCIKRLTPHLQTPHHNPNNHTALSSTTTSANSGDPTSTNKTPRTATYHHRDPTFRDFIPFWLGFIVSCFDCWQQGRHRKRRWFDSQVEGG 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00658 438 MobiDBLite consensus disorder prediction 131 156 - -
Gma02g00658 438 SMART rav1_2 32 95 IPR001471 GO:0003700|GO:0006355
Gma02g00658 438 MobiDBLite consensus disorder prediction 359 391 - -
Gma02g00658 438 CDD AP2 31 88 IPR001471 GO:0003700|GO:0006355
Gma02g00658 438 ProSiteProfiles AP2/ERF domain profile. 32 89 IPR001471 GO:0003700|GO:0006355
Gma02g00658 438 SUPERFAMILY DNA-binding domain 31 89 IPR016177 GO:0003677
Gma02g00658 438 MobiDBLite consensus disorder prediction 187 228 - -
Gma02g00658 438 Pfam AP2 domain 31 81 IPR001471 GO:0003700|GO:0006355
Gma02g00658 438 MobiDBLite consensus disorder prediction 18 34 - -
Gma02g00658 438 MobiDBLite consensus disorder prediction 1 36 - -
Gma02g00658 438 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2 11 300 - -
Gma02g00658 438 Gene3D AP2/ERF domain 31 91 IPR036955 GO:0003700|GO:0006355
Gma02g00658 438 MobiDBLite consensus disorder prediction 184 252 - -
Gma02g00658 438 MobiDBLite consensus disorder prediction 236 252 - -
Gma02g00658 438 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 11 300 - -
Gma02g00658 438 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Gma02g00658 438 PRINTS Ethylene responsive element binding protein signature 55 71 IPR001471 GO:0003700|GO:0006355
Gma02g00658 438 MobiDBLite consensus disorder prediction 357 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00658 Gma-Chr2 6406789 6414093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00658 16 106 AP2-EREBP Transcription Factor Family AT5G19790 68.132 1.33e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma02g00658 AP2 1.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00658 K09286 - gmx:100527497 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00658 02 6406789 6414093 Gma02g00658 02 6406789 6414093 ECH
Gma16g01406 16 33077675 33079032 Gma02g00658 02 6406789 6414093 GST
Gma19g01097 19 39117775 39119016 Gma02g00658 02 6406789 6414093 PCT
Gma16g00364 16 3792474 3793313 Gma02g00658 02 6406789 6414093 PCT
Gma02g00658 02 6406789 6414093 Gma19g01097 19 39117775 39119016 PCT
Gma02g00658 02 6406789 6414093 Gma16g00364 16 3792474 3793313 PCT