Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00631 ATGGGAACCCCACAATCCAATAACTTGCCACCAGGTTTTAGGTTCCACCCTACAGATGAAGAGCTCATTCTTCACTACCTAAGGAAGAAGGTTGCCTCTATTCCTTTGCCAGTTTCCATCATAGCTGAGGTTGATATCTACAAGTTTGATCCATGGGAGCTACCAGCTAAGGCCGAGTTTGGGGAGAAAGAGTGGTACTTCTTCAGTCCTAGAGACCGGAAGTACCCAAATGGAGCAAGGCCAAACAGGGCAGCAGCTTCAGGGTATTGGAAGGCCACAGGCACTGATAAGAACATAGTGGCATCACTGCCAGGAGGAGGGGTTAGAGAGCACTTTGGTGTGAAGAAGGCTTTGGTGTTCTACAAAGGAAGACCCCCAAAGGGTGTCAAGACCAATTGGATCATGCATGAATATCGCTTTGTTGACACCAATAGACCCATTAGGATCAAAGACACCTCCATGAGGTTGGATGACTGGGTTCTATGCCGGATATACAAGAAGACCAAACATGCTGTATCTCCAACCACAGAGGCAGCATCATCAACACTGCAAGTGATCAATGAGCAATTAGATCAAGCAGAAGAAGAGGAGCAAATCAAAGACAACCTTTTACCAATTTTGAAGAACAACACTACTCTTGTCCCTCCTCAACAAACCACACTGCTCATGTCTCAGAAATCTTTATCCTTTTCCAACCTCTTGGATGCCACAGATTACTCCATGCTCAGCACCATCTTATCTGAGAATAACCACTCCAATAATTACCTTACTCCAAGTGAAGCCTTATTCAATAATTGTGAGAATCTGGATCAGGAAATTACCCCCCAAAATTACTACTACAACAACAACACCAATAGCTACTTGTTTCAGAAGAACCCTTCCCACATGGAAAACATGGCTAGGCCAAAACGCCACCTTTCAAACATGGATCATGAGGACAACATGATATTATACCCTTCAAAGAAATATCAAAGTTCCTCTTGCAATTTTCCTAACTCTAATCCACAATGGAACTTCATGTTCAAGCAGCCACTCATGAGTCCTCAATATCTTCCATTTCAGTGA 1065 0.4366 MGTPQSNNLPPGFRFHPTDEELILHYLRKKVASIPLPVSIIAEVDIYKFDPWELPAKAEFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKNIVASLPGGGVREHFGVKKALVFYKGRPPKGVKTNWIMHEYRFVDTNRPIRIKDTSMRLDDWVLCRIYKKTKHAVSPTTEAASSTLQVINEQLDQAEEEEQIKDNLLPILKNNTTLVPPQQTTLLMSQKSLSFSNLLDATDYSMLSTILSENNHSNNYLTPSEALFNNCENLDQEITPQNYYYNNNTNSYLFQKNPSHMENMARPKRHLSNMDHEDNMILYPSKKYQSSSCNFPNSNPQWNFMFKQPLMSPQYLPFQ 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00631 354 PANTHER OS01G0104200 PROTEIN 5 311 - -
Gma02g00631 354 PANTHER NAC TRANSCRIPTION FACTOR 56 5 311 - -
Gma02g00631 354 Coils Coil 176 203 - -
Gma02g00631 354 ProSiteProfiles NAC domain profile. 9 167 IPR003441 GO:0003677|GO:0006355
Gma02g00631 354 SUPERFAMILY NAC domain 6 167 IPR036093 GO:0003677|GO:0006355
Gma02g00631 354 Pfam No apical meristem (NAM) protein 10 139 IPR003441 GO:0003677|GO:0006355
Gma02g00631 354 Gene3D NAC domain 18 172 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00631 Gma-Chr2 6193041 6195677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00631 7 248 NAC Transcription Factor Family AT3G04070 60.569 6.00e-98 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma02g00631 NAM 1.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00631 - - gmx:100806421 714.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00631 02 6193041 6195677 Gma02g00631 02 6193041 6195677 ECH
Gma16g01383 16 32818392 32820781 Gma02g00631 02 6193041 6195677 GST