Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00605 ATGAAACCCTACACATCATCACCATCGTCCTCCAGGTCCAAAAAGAAGCAAACAACAACACAACAAGATCATGAAACAGCATGGGGAGGAAGGTACCTTGGGGTGAGGAGGAGGCCATGGGGAAGGTATGCAGCTGAAATCCGTGACCCTTCCACCAAGGAAAGACATTGGTTAGGCACGTTTGATACCGCAGAAGAGGCCGCCCTAGCATACGATAGGGCGGCCCGCTCCATGCGGGGCTCACGTGCTCGAACCAACTTTGTCTATCCGGACACTCCTCCGGGTTCCTCCGTCACCTCCATCCTTTCTCCGGACGAGCAAACCCAAACCCAAATCCACCAGGCCCAAGAAGAGCTCTCCTCTCTATTCAATCCGAACCCGTTTGCACAACCCGACCCAAACCCGCATTTTTCCTTATGCGGGTATTCGGGTGTCACGAACACTCCTACATTTTCTGCCACCGAAGAAATTGCCCCATCCGGTGGCTATAGCTATAATTATGGATACACTGAAGGAGGAACCAGCATGGAGAGTTCACATTTTAAGCTCTTTGATGATGGTGAAACGGAGCTTCCACCATTGCCACCGGATATCACAAGCTCCATGGGCTATGAAATGGGTAATGGGTTTTATGGAAACGATGCCGGGTTTTCGGATCCAAGTTTCGGCGCTAATGCTACCGGGTCAGGTTACCCATATTCGGGATTTGGATCCGGTGATTACGTGGTGCATAGTCCACTCTTTAGCGCAATGCCACCAGTGTCAGATAATGTTTCAACGGGCCATGAGGGTTTTGATTTGGCAAGCTCTTCTTTTTTCTTCTGA 825 0.5055 MKPYTSSPSSSRSKKKQTTTQQDHETAWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSRARTNFVYPDTPPGSSVTSILSPDEQTQTQIHQAQEELSSLFNPNPFAQPDPNPHFSLCGYSGVTNTPTFSATEEIAPSGGYSYNYGYTEGGTSMESSHFKLFDDGETELPPLPPDITSSMGYEMGNGFYGNDAGFSDPSFGANATGSGYPYSGFGSGDYVVHSPLFSAMPPVSDNVSTGHEGFDLASSSFFF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00605 274 Pfam AP2 domain 32 80 IPR001471 GO:0003700|GO:0006355
Gma02g00605 274 PRINTS Ethylene responsive element binding protein signature 32 43 IPR001471 GO:0003700|GO:0006355
Gma02g00605 274 PRINTS Ethylene responsive element binding protein signature 54 70 IPR001471 GO:0003700|GO:0006355
Gma02g00605 274 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP 9 274 - -
Gma02g00605 274 MobiDBLite consensus disorder prediction 1 31 - -
Gma02g00605 274 MobiDBLite consensus disorder prediction 1 26 - -
Gma02g00605 274 CDD AP2 31 87 IPR001471 GO:0003700|GO:0006355
Gma02g00605 274 SMART rav1_2 31 94 IPR001471 GO:0003700|GO:0006355
Gma02g00605 274 ProSiteProfiles AP2/ERF domain profile. 31 88 IPR001471 GO:0003700|GO:0006355
Gma02g00605 274 Gene3D AP2/ERF domain 30 89 IPR036955 GO:0003700|GO:0006355
Gma02g00605 274 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 9 274 - -
Gma02g00605 274 SUPERFAMILY DNA-binding domain 31 88 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00605 Gma-Chr2 6017915 6018739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00605 9 265 AP2-EREBP Transcription Factor Family AT5G13910 46.304 5.77e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma02g00605 AP2 1.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00605 K09286 - gmx:100815668 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01360 16 32572556 32573850 Gma02g00605 02 6017915 6018739 GST
Gma16g00417 16 4436663 4437782 Gma02g00605 02 6017915 6018739 PCT
Gma01g01885 01 54404453 54405491 Gma02g00605 02 6017915 6018739 PCT
Gma11g00518 11 4338878 4340160 Gma02g00605 02 6017915 6018739 PCT
Gma02g00605 02 6017915 6018739 Gma01g01885 01 54404453 54405491 PCT
Gma02g00605 02 6017915 6018739 Gma11g00518 11 4338878 4340160 PCT
Gma02g00605 02 6017915 6018739 Gma16g00417 16 4436663 4437782 PCT