Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma02g00603 | ATGGTTCTTCAGAATGATATTGATTTGCTGAATCCTCCAGCTGAGTTGGAGAAGAGAAAACACAAACTCAAGCGTCTTGTTCAGTCACCAAACTCTTTCTTCATGgatgttaagtgccagggatgcttcaacatAACAACTGTGTTTAGCCACTCTCAAACTGTTGTGGTGTGCGGAAACTGCCAGACTGTTTTGTGCCAACCAACAGGGGGACGGGCGAGGTTAACCGAAGGTTGCTCATTTAGGAAGAAGGGAGATTGA | 261 | 0.4023 | MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD | 86 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma02g00603 | 86 | PANTHER | 40S RIBOSOMAL PROTEIN S27-RELATED | 2 | 85 | - | - | |
Gma02g00603 | 86 | PANTHER | 40S RIBOSOMAL PROTEIN S27 | 2 | 85 | IPR000592 | GO:0003735|GO:0005840|GO:0006412 | |
Gma02g00603 | 86 | Hamap | 30S ribosomal protein S27e [rps27e]. | 24 | 84 | IPR000592 | GO:0003735|GO:0005840|GO:0006412 | |
Gma02g00603 | 86 | Pfam | Ribosomal protein S27 | 30 | 84 | IPR000592 | GO:0003735|GO:0005840|GO:0006412 | |
Gma02g00603 | 86 | Gene3D | - | 5 | 85 | IPR023407 | - | |
Gma02g00603 | 86 | SUPERFAMILY | Zn-binding ribosomal proteins | 30 | 84 | IPR011332 | GO:0006412 | |
Gma02g00603 | 86 | ProSitePatterns | Ribosomal protein S27e signature. | 38 | 70 | IPR000592 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma02g00603 | Gma-Chr2 | 5999640 | 6001199 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma02g00603 | 1 | 86 | Cytoplasmic Ribosomal Protein Gene Family | AT3G61110 | 95.349 | 8.03e-60 | 175 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma02g00603 | K02978 | - | gmx:100499804 | 177.178 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma16g01358 | 16 | 32519434 | 32520725 | Gma02g00603 | 02 | 5999640 | 6001199 | GST | |
Gma16g00419 | 16 | 4485433 | 4487306 | Gma02g00603 | 02 | 5999640 | 6001199 | PCT | |
Gma02g00603 | 02 | 5999640 | 6001199 | Gma16g00419 | 16 | 4485433 | 4487306 | PCT |