Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00584 ATGGAGAAGAACCTTGCCGAGAATTCTGGCAAAGCCGAAGACATGAACACCGGCGACAACACTACCAATTCGCCGGCAGCGCCGGAGCCCGAAGATAATAAACTCGACGCCAAAACGGACGGCGAAGGAGAAAAAGCCGCGGATTCAGATCACGCCGAGGGAGACCAAGATCCCAAAGAGGAAGAGAAGAAGGAAGAAGAAGAAGAAGAAACCGCGGAGGCTCCACCGGATTCTCCCCCTCCAAACCTCGAGAAGGTTTCAGAAGACATTGACAAATTGCTCGCCACTCAGCAACACAATGCAGATGCTAACAAGAAAGAAGTCACCACATTCGATACGCCTAATTTCATCCCCATTTTCTTGCAACTAGTGGAAGAGAAAATGAAGAGGTACGAAACAAATGAGGCAAAATTGGGTGAGAATGCGGAAGAGAAATCGTCGTTTCTGGAATGCGTGAATCGCATCTCAAAGCTGATGAAACATTTCTCGGAGTACGCTCAATCTCATCAAGAGGAAGATCAAGAAGAAAACAAGGACAAGGTCAAGGGAAAAACAGACTTGATAATCAACGGCCTCGGCGCGCTTCAGCAGCGTGCGATGTCGTTTTTGGAGGACGAGTTTCGGTCTCTAATGGAAGAATCTAGAAACCAAGCCAAACCCGCAGAGCAAAACCAGAACCAGAAGGGGAAACAACAACAAGTGGCGGAATCTTCTGAGCCCGAGTCACCTGCAGAAATGGTTACGGATTTCCCGGGTTTACCGGAGGAAACGGTTACGAAACTGAGCAAAATAGCTAAAGAAATGATCACAGGCGGTTACGGAAAAGAGTGCTGCCATGTCTACGCGCTTTCGCGAAGGCACGCGTTCGAAGACGGAATGCACAAGCTACTAGGTTGCGAGAAGCTCAGCATCGATGAAGTTCAGAAAATGCAGTGGGAGCCACTGGAGCGCGAGATCCCACTGTGGATCAACACGTGGAAGGAATGCACCTCCGTGTGGTTCCCTGGCGAGTGGAGGCTCGCGGAGTCAGTGTTCGGCGAAGAGAAGGAGCAAGATTCTTCCCTATCGACGAACAATATCGCGGCGAGCCTCTTTGCTAACCTCTCCCGCGGAATCATGATCCAGCTTCTCAATTTCGCGGAGAGTGTCGCCATGACGAAGCGCGCCAGCGAGAAGCTCTTCAAGTTCCTCGACATGTACGAGACCTTGAGGGACGTTATTCCCGACATGGAGAGCCTCTTCCCCGCCGACGACGGGGAGATCAAGGCCGAGACGACCTCGGCCAAGTGCCGCCTCGGCGAGGCGGCGGTGCTGATATTCTGTGACCTCGAGAACTCTATCAAATCGGAAACCGGAAAAACTCCGGTAGCCGGCGGCGCGGTGCATCCCCTCACGCGCTACATCATGAACTACTTAAGGCTAGCGTGTGAATACAAAGACACTTTAGAAGAAGTGTTCAAAGAACACTCCAAAATGGAGCGGGCAGATTCAACAAGCAGGCCACAATACGAAGATACCAAACCAAACAACAACAACAAACAGAAAGAAAACGTGTCACCTTTCGCGGCGCAGTTAATGAGGGTGATGGAGCTTCTGGACACAAATCTCGAAGGAAAAGCGAAGCTGTACAAAGAAGTACCACTGAGCTGCATATTCATGATGAACAACGGAAGGTACATAGTTCAGAAGATAAAAGGCTCTACGGAGATCTACGAAGTGATGGGAGAAACGTGGTGTCGCAAGAGATCGACGGAGCTGAGAACTTACCACAAGAACTACCAGGTTGAAACGTGGAGCAAGATTCTGAGTTCTCTTAGCCCTAAAGGTTTGAACGAGAACGGGAAGGTGCACAAGCCGGTGCTGAAGGAGCGCTTCAAGAGCTTCAACGCGGCGTTTGAGGAGATTCACAAGACGCAGAGCGCGTGGGTGGTGTACGACGAACAGCTTCAGTCGGAGCTTAGGGTTTCTATTTCCGCGCTCGTGATTCCGGCGTACAGGTCCTTCTTGGGAAGGTTTTCGCAATACTTAGATCCCGGAAGGCAAACTGTAAAATATATTAAGTATCAAGCTGAAGATGTTGAGACTTGCATTGATGAGTTGTTTGATGGGAACCCTCATGGGCGTCGCTAG 2130 0.5038 MEKNLAENSGKAEDMNTGDNTTNSPAAPEPEDNKLDAKTDGEGEKAADSDHAEGDQDPKEEEKKEEEEEETAEAPPDSPPPNLEKVSEDIDKLLATQQHNADANKKEVTTFDTPNFIPIFLQLVEEKMKRYETNEAKLGENAEEKSSFLECVNRISKLMKHFSEYAQSHQEEDQEENKDKVKGKTDLIINGLGALQQRAMSFLEDEFRSLMEESRNQAKPAEQNQNQKGKQQQVAESSEPESPAEMVTDFPGLPEETVTKLSKIAKEMITGGYGKECCHVYALSRRHAFEDGMHKLLGCEKLSIDEVQKMQWEPLEREIPLWINTWKECTSVWFPGEWRLAESVFGEEKEQDSSLSTNNIAASLFANLSRGIMIQLLNFAESVAMTKRASEKLFKFLDMYETLRDVIPDMESLFPADDGEIKAETTSAKCRLGEAAVLIFCDLENSIKSETGKTPVAGGAVHPLTRYIMNYLRLACEYKDTLEEVFKEHSKMERADSTSRPQYEDTKPNNNNKQKENVSPFAAQLMRVMELLDTNLEGKAKLYKEVPLSCIFMMNNGRYIVQKIKGSTEIYEVMGETWCRKRSTELRTYHKNYQVETWSKILSSLSPKGLNENGKVHKPVLKERFKSFNAAFEEIHKTQSAWVVYDEQLQSELRVSISALVIPAYRSFLGRFSQYLDPGRQTVKYIKYQAEDVETCIDELFDGNPHGRR 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00584 709 MobiDBLite consensus disorder prediction 216 239 - -
Gma02g00584 709 MobiDBLite consensus disorder prediction 93 107 - -
Gma02g00584 709 PANTHER EXOCYST COMPLEX PROTEIN EXO70 54 709 IPR004140 GO:0000145|GO:0006887
Gma02g00584 709 MobiDBLite consensus disorder prediction 1 107 - -
Gma02g00584 709 MobiDBLite consensus disorder prediction 10 28 - -
Gma02g00584 709 MobiDBLite consensus disorder prediction 489 517 - -
Gma02g00584 709 MobiDBLite consensus disorder prediction 31 59 - -
Gma02g00584 709 MobiDBLite consensus disorder prediction 60 74 - -
Gma02g00584 709 MobiDBLite consensus disorder prediction 502 517 - -
Gma02g00584 709 MobiDBLite consensus disorder prediction 212 253 - -
Gma02g00584 709 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 54 709 - -
Gma02g00584 709 SUPERFAMILY Cullin repeat-like 139 702 IPR016159 -
Gma02g00584 709 Pfam Exo70 exocyst complex subunit 322 699 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gma02g00584 709 Gene3D Exocyst complex component Exo70 127 709 - -
Gma02g00584 709 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00584 Gma-Chr2 5842372 5844501 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00584 1 704 EXO70 exocyst subunit family AT5G13990 48.977 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00584 K07195 - gmx:100819960 1375.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00475 16 5142506 5144647 Gma02g00584 02 5842372 5844501 PCT
Gma02g00584 02 5842372 5844501 Gma16g00475 16 5142506 5144647 PCT