Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00545 ATGTCAGTGGTGGTTCATGTTCAGGGAAAGCAACCTTACGTTGGTTTGGCCACAACAGCATGTGGCCAAACGGGAAATTCAAACTCTATGCGTGGCTACACTTGCAATGGCGTGAATCCTAGTTGCCAAGCTTACCTCACCTTCAGGGCTCAACCCCTTTACAACACTGTTCCCTCAATATCTGCTTTGTTGGGTTCAGACTCATCTCAACTTTCTGTGGCAAATTCTGTTTCTGAGGATGGAACCTTTGAAACAAACAAGTTAGTGATTGTTCCAATCAATTGCTCTTGTTCAGGTAACAACAACAACCAGTATTATCAGTTCAACACATCCTACGAGGTTGAAAGAGGGGACTCGTATTTTGTGATCGCTAACAACACTTTTGAAGGCCTTTCAACATGTCAAGCATTGCAGGACCAAAACAACATTCCCGAAGGAGACTTAATGCCGGGAAATGAACTCATTGTTCCTCTTCGATGCGCTTGTCCCTCGAAGAATCAAACTGAGCAAGGTGTCAAGTACTTGTTGAGTTACCTTGTGGCTTCTAATGACATTGTTTGGCTCATTGGTGAAAGATTTGGTGTCAGCAGTGAGACAATTGTTGAAGCTAATACTCTTTCTTCTCAACAACCAATAATTCATCCTTTTACCACACTTCTTGTACCTCTTCAAGACGAGCCCTCGAGTAATCAAACTTCTGAGCCATCTCCACCACCATCAACACCTCCACCTCCGCCTCTATCTTCTTCTAGTGGAAGATCAAGCAAAACATGGGTGTATGCAGTGGTAGGAGTTGTTGGAGCTATTGCATTAATATCATCAGTCCTTTGTGCCATCGTTTTCAGGACGCGTTATCTCAAGGGTGGTAATAAAAGGAAAGATGATTCTTTGATTGTGTCTGATAGTTTTGTGGCTGTGGCTATTGAGAAACCACAAGAGAAGAAGTTGGAAGAAGAAGAATCTGAAAATTTGGCAGAGATCATATCTGGCATAAGTGAATCATTTAAGGTGTACAGATATGAGGAACTGCAAAGTGCAACGAATGGTTTTAGTCCTAGCTGCTGCATCAAAGGGTCGGTTTATCGCGGTTTCATCAATGGGGATTTGGCTGCAATAAAAAAGATAGATGGTGATGTGTCAAAGGAGATAGAGCTTTTGAGCAAAGTGAACCATTCAAATGTTATACGTCTTTCTGGGGTTTGTTTTAACGGGGGCTATTGGTATCTTGTTTATGAGTATGCTGCTAACGGATACTTGAGTGATTGGATCAACATCAAGGGAAAGTTTCTGAGTTGGACACAAAGAATTCAAATTGCATTGGATGTTGCTACAGGACTTGACTATCTTCATAGTTTCACTTCTCCTCCTCATGTACACAAGGATCTGAAGAGTGGTAACATTCTTCTGGATAGTGATTTCAGGGCAAAGATTTCAAACTTTAGGCTTGCAAGGTCAGTGGAAAGAGAGGGTAGTGAGGGTGATCAATATGTGATGACAAGGCATATTGTTGGGACAAGAGGATACATGGCTCCAGAGTATTTGGAAAATGGTCTTGTGTCTACAAAGCTTGATGTCTACGCATTTGGGGTTTTAATGTTGGAAATGCTCACTGGAAAAGATGTTGCTGATGTTTATGCAGAAGGAAATATTGCGAATTTGTTTGATGTTTTAAGCGCGGTGCTTGACGAGGAAGGTGAACATTTGAGATTGAGTGAGTTCATGGATCCCTCTTTGAAAGGAAATTATCCAATGGAACTTGCTGTGTTTGTGGCTAGAATGATAGAAACTTGCATAAAGAAAGATCCAGCAAGTCGACCTGACATGCACGAGATTGTGTCATCTTTGTCCAAAGCCTTGGATTCTTCATTGAGATGGGAAACGTCTATGGAAAGGAAGTTTAGATTCTACAAAGGGTTCCTCAATTAG 1926 0.4164 MSVVVHVQGKQPYVGLATTACGQTGNSNSMRGYTCNGVNPSCQAYLTFRAQPLYNTVPSISALLGSDSSQLSVANSVSEDGTFETNKLVIVPINCSCSGNNNNQYYQFNTSYEVERGDSYFVIANNTFEGLSTCQALQDQNNIPEGDLMPGNELIVPLRCACPSKNQTEQGVKYLLSYLVASNDIVWLIGERFGVSSETIVEANTLSSQQPIIHPFTTLLVPLQDEPSSNQTSEPSPPPSTPPPPPLSSSSGRSSKTWVYAVVGVVGAIALISSVLCAIVFRTRYLKGGNKRKDDSLIVSDSFVAVAIEKPQEKKLEEEESENLAEIISGISESFKVYRYEELQSATNGFSPSCCIKGSVYRGFINGDLAAIKKIDGDVSKEIELLSKVNHSNVIRLSGVCFNGGYWYLVYEYAANGYLSDWINIKGKFLSWTQRIQIALDVATGLDYLHSFTSPPHVHKDLKSGNILLDSDFRAKISNFRLARSVEREGSEGDQYVMTRHIVGTRGYMAPEYLENGLVSTKLDVYAFGVLMLEMLTGKDVADVYAEGNIANLFDVLSAVLDEEGEHLRLSEFMDPSLKGNYPMELAVFVARMIETCIKKDPASRPDMHEIVSSLSKALDSSLRWETSMERKFRFYKGFLN 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00545 641 SUPERFAMILY Protein kinase-like (PK-like) 332 615 IPR011009 -
Gma02g00545 641 Gene3D LysM domain 166 237 IPR036779 -
Gma02g00545 641 MobiDBLite consensus disorder prediction 224 253 - -
Gma02g00545 641 Pfam LysM domain 112 157 IPR018392 -
Gma02g00545 641 Pfam LysM domain 178 222 IPR018392 -
Gma02g00545 641 ProSiteProfiles LysM domain profile. 176 221 IPR018392 -
Gma02g00545 641 CDD LysM 177 221 IPR018392 -
Gma02g00545 641 ProSiteProfiles Protein kinase domain profile. 292 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g00545 641 Gene3D LysM domain 107 165 IPR036779 -
Gma02g00545 641 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 4 4 630 - -
Gma02g00545 641 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 4 630 - -
Gma02g00545 641 Gene3D Transferase(Phosphotransferase) domain 1 415 635 - -
Gma02g00545 641 MobiDBLite consensus disorder prediction 232 249 - -
Gma02g00545 641 Gene3D Phosphorylase Kinase; domain 1 316 413 - -
Gma02g00545 641 Pfam Protein kinase domain 371 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g00545 641 SMART serkin_6 340 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g00545 641 SMART LysM_2 177 222 IPR018392 -
Gma02g00545 641 SMART LysM_2 111 157 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00545 Gma-Chr2 5416320 5418245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00545 1 628 Receptor kinase-like Gene Family AT2G23770 45.656 8.26e-176 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gma02g00545 Pkinase 3.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00545 - - gmx:100806077 1190.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00545 02 5416320 5418245 Gma02g00545 02 5416320 5418245 ECH