Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00523 ATGTCTTCCCCTCataactctgctcctcataattcctcacccgataactccacccctgatgatgccactcccaataactctgttcctgataattccacacccgataactccattcctgataattccacacccgataactccattcccgataattccacacccgataactccacatccaataaatccgctccccataactccacacctgataacgccactcccgataattccacacccgataattccaATAAATCACCCAAAAGTTCCTCGGTGTCCCCTCCTTCGATGGAGGGACAAAGTACTCCAACATCAGGAAAAGATTCATCAAACAAATCATTATCAAATGAGAAATCATCGGGTTCAAACAATGATAGTAGCAATAAAGTAGCAATGGGAGCTGGGATTGGAGTAGGGTTCATTCTTCTTGTGCTAGTCATTGTGTGTTTCATTTGGAGTTGTAGGAAGAAGAAGCGAAAACAAAAGTATTATTATCCAAACCCTTCTCACGGGAAAGCGAGTAACTATTACAACAGTGGGCAACACCCTCTCCCTAGTTGGCAAGCAGGTAATTCAGGTCCTCATGGGGGTGACCATGTTATGAGGATACAACAACAACAaatgggaatgggaatgggaatgggaatgggaGGAATGGGTCCTCATAGTGGTGGATGGGGTGCACCACCACCACATATGATGAATAGTGGTGAAATGATGAGCTCAAATTACTCATTGGGAATGAGTTCTTCCTCACCAGGCCTTTCTCTTGCGCTCAATGCCAATGGTGGTACATTCACTTATGAGGAACTAGCAGCTGCCACCAAAGGATTTGCCAATGAGAACATCATAGGACAAGGTGGCTTTGGTTATGTCCATAAGGGGATTTTGCCTAATGGAAAGGAAGTGGCTGTTAAGAGTCTTAAAGCGGGTAGTGGCCAAGGAGAGCGCGAGTTCCAAGCTGAGATCGACATCATTAGCCGTGTTCATCATCGACATCTTGTGTCACTTGTTGGATATTGCATTTGTGGAGGGCAAAGAATGTTGGTCTATGAATTTGTTCCCAATTCGACTTTGGAACATCACCTTCATGGAAAGGGCATGCCTACGATGGATTGGCCTACTAGAATGAAAATTGCACTTGGATCCGCTAAAGGACTTGCCTACCTTCATGAAGATTGTAACCCTCGCATTATCCACCGTGATATTAAAGCTTCTAATGTCCTTCTCGATCAAAGCTTCGAAGCAAAGGTCTCTGATTTTGGATTGGCTAAGTTGACCAATGATACTAATACACACGTCTCAACTCGTGTCATGGGAACATTCGGGTATCTGGCCCCAGAATACGCATCAAGTGGAAAATTGACAGAGAAATCTGATGTTTTCTCATTTGGGGTCATGCTATTAGAACTCATAACTGGGAAACGACCTGTAGATTTGACAAATGCCATGGAGGACAGTTTGGTGGATTGGGCTCGACCACTCCTGAATAAAGGGTTGGAGGATGGAAACTTTGGAGAGTTAGTGGATCCATTTTTGGAAGGCAAATACAATCCCCAAGAAATGACAAGAATGGCAGCCTGTGCTGCTGGAAGCATTCGTCATTCTGCCAGGAAACGTTCAAAGATGAGTCAGATTGTAAGAGCACTGGAAGGAGAAGCCTCATTGGATGAATTGAAAGATGGAATGAAGCTTAAGGGGAGTGGGAATGGGAATAGCAGTGCTCCCACTTCTTCATCTGGGAGCTCAGAATATGATACAATGCAATATAATGCTGATATGATAAAGTTTAGACAGGCAATAATGTCAAGCCAAGAATTTAACGACAGCAGTGAGCTTTCCAGTAAGGAGATGGGTTATCATTAG 1863 0.3741 MSSPHNSAPHNSSPDNSTPDDATPNNSVPDNSTPDNSIPDNSTPDNSIPDNSTPDNSTSNKSAPHNSTPDNATPDNSTPDNSNKSPKSSSVSPPSMEGQSTPTSGKDSSNKSLSNEKSSGSNNDSSNKVAMGAGIGVGFILLVLVIVCFIWSCRKKKRKQKYYYPNPSHGKASNYYNSGQHPLPSWQAGNSGPHGGDHVMRIQQQQMGMGMGMGMGGMGPHSGGWGAPPPHMMNSGEMMSSNYSLGMSSSSPGLSLALNANGGTFTYEELAAATKGFANENIIGQGGFGYVHKGILPNGKEVAVKSLKAGSGQGEREFQAEIDIISRVHHRHLVSLVGYCICGGQRMLVYEFVPNSTLEHHLHGKGMPTMDWPTRMKIALGSAKGLAYLHEDCNPRIIHRDIKASNVLLDQSFEAKVSDFGLAKLTNDTNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDLTNAMEDSLVDWARPLLNKGLEDGNFGELVDPFLEGKYNPQEMTRMAACAAGSIRHSARKRSKMSQIVRALEGEASLDELKDGMKLKGSGNGNSSAPTSSSGSSEYDTMQYNADMIKFRQAIMSSQEFNDSSELSSKEMGYH 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00523 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 397 409 IPR008271 GO:0004672|GO:0006468
Gma02g00523 620 Gene3D Transferase(Phosphotransferase) domain 1 353 565 - -
Gma02g00523 620 ProSitePatterns Protein kinases ATP-binding region signature. 283 305 IPR017441 GO:0005524
Gma02g00523 620 MobiDBLite consensus disorder prediction 560 584 - -
Gma02g00523 620 PANTHER RECEPTOR-LIKE KINASE 37 619 - -
Gma02g00523 620 MobiDBLite consensus disorder prediction 1 126 - -
Gma02g00523 620 Pfam Protein tyrosine and serine/threonine kinase 280 479 IPR001245 GO:0004672|GO:0006468
Gma02g00523 620 SMART serkin_6 277 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g00523 620 Gene3D Phosphorylase Kinase; domain 1 246 352 - -
Gma02g00523 620 SUPERFAMILY Protein kinase-like (PK-like) 255 549 IPR011009 -
Gma02g00523 620 MobiDBLite consensus disorder prediction 566 584 - -
Gma02g00523 620 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 37 619 - -
Gma02g00523 620 ProSiteProfiles Protein kinase domain profile. 277 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00523 Gma-Chr2 5215022 5219316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00523 86 611 Trihelix Transcription Factor Family AT1G70460 48.964 4.11e-155 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Gma02g00523 PK_Tyr_Ser-Thr 7.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00523 - - gmx:100800744 1060.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00523 02 5215022 5219316 Gma16g01288 16 31445106 31449392 ECH
Gma02g00523 02 5215022 5219316 Gma02g00523 02 5215022 5219316 ECH
Gma16g01288 16 31445106 31449392 Gma02g00523 02 5215022 5219316 GST
Gma11g00617 11 5113420 5117002 Gma02g00523 02 5215022 5219316 PCT
Gma02g00523 02 5215022 5219316 Gma11g00617 11 5113420 5117002 PCT