Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00520 ATGTCAGACTCACACCTGATCACTTTCTGTTTTCTTTCTTGTTCCATCCTTGCTCTTATTCTCATCACCTTCATTTTCACCAGAAGAAAGAAACCAAAGTTTAATCTTCCCCCTGGCCAAATGGGGTGGCCCCTTCTTGGGGAAACCATAGGGTATTTGAACCCTTACCCTGCTGTTACACTTGGAGAATTTATGGAGAACCACATAGCAAGGTATGGTAAAATTTACAAGTCAAACTTGTTTGGGGGGCCAGCCATAGTGTCAGCAGATGCAGGGCTGAATAGGTTCATATTGCAGAACGATGGGAAGTTGTTTGAGATCAGCTATCCTAAGAGCATTCGTGATATACTCGGGAAATGGTCTATGTTGGTCTTAGTAGGGGACATGCACAAGGAAATGAGGAACATTTCACTCAACTTTCTCAGCAATGCTAAGCTCCGAACACATCTTGTCAAAGAGGTCGAGAGGCATGCCCTTCTCGTTATTAACTCATGGAACAATAATTCTACATTCTCCGCTCTACAAGAAGCCAAAAAGTTCACCTTCAATTTTATGGCGAAACGTATAATGAGCTTGGAGCCTGGGAATCCCGAAACAGGACAATTGAGGAGAGAATATGTGTCTTTCATGAAGGGTGTTGTATCTACTGCGCCTTTGAATTTGCCCGGAACAGCATACAGGAAAGCATTAAAGTCTAGGGGTGCCGTAAAGAAGATTATAGAGGGGAAAATGGAAGAAAGGAACAAGAGGATCCAAAAGGGTAACGCAAGTTTGGAGGAAGACCATGATCTTCTAAGTTGGGTTATGACGCACACAAATCTTTCAAATGAGCAAATACTTGACTTGGTATTGAGCTTGCTCTTTGCTGGCCACGAAACCTCATCGGTAGCCATAGCTCTAGCTATTTACTTCTTGCCGGGTTGTCCTCGAGCCATACAACAATTAAGGGAAGAACACGTGGAAATAGTCACTTCAAAGAAGCAGACAGGGGAAGTTGAATTGACTTGGGATGATTACAAAAGAATGGAGTTTACTCACTGTGTTGTGAACGAAACACTTCGATTAGGAAATGTTGTGAGGTTTATTCACAGGAAGGCTATTAAGGATGTTCACTACAAAGGTTATGATATTCCATGTGGGTGGAAAGTCCTTCCGGTGGTTTCAGCTGTGCATCTCGATCCTGCACTTTTTGACCAACCTCACCAATTTAATCCTTGGAGATGGCAGGACAAGAATAAGAGTGGAAGTTGCGAAAACGCGAATGTTAACATGAACTTGATGGCGTTTGGAGGAGGACCAAGGATGTGTGCGGGATCAGAGTTAGGGAAACTTGAAATGGCTGTGTTCATCCACCATCTCATCCTCAACTACAACTGGGAACTTGTTGGAGAGGATCAACCTATTGCATACCCTTACGTTGATTTCCCCAAAGCTTTACCCATCAAAGTCCAAACCCACTCTTCCAAACACTCCTCATTTAGTAGCTAG 1488 0.4335 MSDSHLITFCFLSCSILALILITFIFTRRKKPKFNLPPGQMGWPLLGETIGYLNPYPAVTLGEFMENHIARYGKIYKSNLFGGPAIVSADAGLNRFILQNDGKLFEISYPKSIRDILGKWSMLVLVGDMHKEMRNISLNFLSNAKLRTHLVKEVERHALLVINSWNNNSTFSALQEAKKFTFNFMAKRIMSLEPGNPETGQLRREYVSFMKGVVSTAPLNLPGTAYRKALKSRGAVKKIIEGKMEERNKRIQKGNASLEEDHDLLSWVMTHTNLSNEQILDLVLSLLFAGHETSSVAIALAIYFLPGCPRAIQQLREEHVEIVTSKKQTGEVELTWDDYKRMEFTHCVVNETLRLGNVVRFIHRKAIKDVHYKGYDIPCGWKVLPVVSAVHLDPALFDQPHQFNPWRWQDKNKSGSCENANVNMNLMAFGGGPRMCAGSELGKLEMAVFIHHLILNYNWELVGEDQPIAYPYVDFPKALPIKVQTHSSKHSSFSS 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00520 495 PRINTS P450 superfamily signature 289 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma02g00520 495 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma02g00520 495 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma02g00520 495 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma02g00520 495 PANTHER CYTOCHROME P450 26 18 463 - -
Gma02g00520 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Gma02g00520 495 Gene3D Cytochrome P450 26 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma02g00520 495 SUPERFAMILY Cytochrome P450 33 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma02g00520 495 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma02g00520 495 PRINTS E-class P450 group I signature 278 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma02g00520 495 PRINTS E-class P450 group I signature 298 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma02g00520 495 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma02g00520 495 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma02g00520 495 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma02g00520 495 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma02g00520 495 Pfam Cytochrome P450 37 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma02g00520 495 PANTHER CYTOCHROME P450 90B1 18 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00520 Gma-Chr2 5183164 5188866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00520 28 413 Cytochrome P450 AT3G50660 67.488 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00520 K09587 - gmx:100800210 984.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00520 02 5183164 5188866 Gma02g00520 02 5183164 5188866 ECH
Gma11g00622 11 5167572 5172174 Gma02g00520 02 5183164 5188866 PCT
Gma02g00520 02 5183164 5188866 Gma11g00622 11 5167572 5172174 PCT