Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00466 ATGGAGTGTTTGGAAGCAGCGTTGAAGAGCAGTTTCAGGAAAGACATGGCCCTCAAACAAACGTTGTTCCTAGAGGAGTTCTCGTCCGCCTCTAACGTTCAAAACGTCGTCGCTTCCTCCGACGACTTGTTCGTTGACGACCTCCTCAACTTTTCACTCCTCGAAAACAACACCAACAACAATAACAACAACGAAGAACCCGACCAACAACTCAACAACCACGACTCCACCACCCCTCAGAACAACCAGGAAAATTACAATTATAACCCCTCCTTCAACGACAACAATTTCAACACCGAACTCACCGTTCCGGCGGAGGAGGAAGTTGCGGACTTGGAATGGTTGTCTCGTTTCGTCGAAGATTCTAATTTCTCGGAATATTCTCTTCCCTTCCCCGCAACCGTGACTGAGAAAGTGAAAGTGAAATCACCGGAACCGGGAAATACCGCTTTCACTTTCAAAACCCCGGTTCCGGCCAAGGCCAGGAGCAAGCGAACGCGAACCGGTGTCCGGGTTTGGCCGCTCAAGTCACCCTCTTTGGCCGCCGCGTCTTCAACAACAACCTCGTCCTCGTCCTCGTCTTCGCCCTCGAGTCCGCAACGTGCGGACTCGAGGGCGAAGAAGCGTGCCGCTGCGGACGGCGGCGCGGCGCGACGGTGCAGCCACTGTGGCGTTCAGAAAACGCCGCAGTGGCGCACCGGACCGCTCGGGGCTAAGACTCTGTGCAACGCGTGTGGGGTCCGCTACAAGTCGGGTCGGTTATTACCCGAATATAGACCCGCCTGTAGCCCTACTTTCTCCAGCGAGTTGCACTCCAACCACCACCGAAAGGTCCTCGAGATGCGGCGGAAGAAGGAGGACGTGCCTGAGCCCGACACCGCTTCGCCACCGTCGCTTCCCGGTTTTTGA 909 0.5578 MECLEAALKSSFRKDMALKQTLFLEEFSSASNVQNVVASSDDLFVDDLLNFSLLENNTNNNNNNEEPDQQLNNHDSTTPQNNQENYNYNPSFNDNNFNTELTVPAEEEVADLEWLSRFVEDSNFSEYSLPFPATVTEKVKVKSPEPGNTAFTFKTPVPAKARSKRTRTGVRVWPLKSPSLAAASSTTTSSSSSSSPSSPQRADSRAKKRAAADGGAARRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRKVLEMRRKKEDVPEPDTASPPSLPGF 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00466 302 MobiDBLite consensus disorder prediction 269 302 - -
Gma02g00466 302 Gene3D - 213 287 IPR013088 GO:0006355|GO:0008270
Gma02g00466 302 MobiDBLite consensus disorder prediction 152 225 - -
Gma02g00466 302 PANTHER GATA TRANSCRIPTION FACTOR 1 286 - -
Gma02g00466 302 MobiDBLite consensus disorder prediction 270 291 - -
Gma02g00466 302 PIRSF Txn_fac_GATA_plant 8 297 IPR016679 GO:0003677|GO:0005634|GO:0045893
Gma02g00466 302 Pfam GATA zinc finger 220 254 IPR000679 GO:0006355|GO:0043565
Gma02g00466 302 ProSitePatterns GATA-type zinc finger domain. 220 245 IPR000679 GO:0006355|GO:0043565
Gma02g00466 302 SMART GATA_3 214 268 IPR000679 GO:0006355|GO:0043565
Gma02g00466 302 MobiDBLite consensus disorder prediction 56 92 - -
Gma02g00466 302 CDD ZnF_GATA 220 267 IPR000679 GO:0006355|GO:0043565
Gma02g00466 302 ProSiteProfiles GATA-type zinc finger domain profile. 214 250 IPR000679 GO:0006355|GO:0043565
Gma02g00466 302 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 212 276 - -
Gma02g00466 302 MobiDBLite consensus disorder prediction 179 201 - -
Gma02g00466 302 PANTHER GATA TRANSCRIPTION FACTOR 1 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00466 Gma-Chr2 4670513 4672102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00466 5 302 C2C2-Gata Transcription Factor Family AT5G66320 45.272 2.10e-67 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Gma02g00466 GATA 4.1e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00466 - - gmx:100786449 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00466 02 4670513 4672102 Gma16g01228 16 30180886 30184160 ECH
Gma02g00466 02 4670513 4672102 Gma02g00466 02 4670513 4672102 ECH
Gma16g01228 16 30180886 30184160 Gma02g00466 02 4670513 4672102 GST