Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00456 ATGATGGAGTCATGTGTCCCACCGGGGTTTCGGTTCCACCCAACAGATGAAGAGCTTGTGGGTTACTATCTgaggaagaaagttgcttctcagaagattgatcttgacgttatcaaagagatcgacctatatcgtattgaaccatgggatctacaagAGATATGCAGGATTGGGTACGAGGAGCAGAATGAGTGGTATTTCTTTAGCCACAAAGATAAGAAATATCCAACTGGGACAAGAACCAACAGAGCCACCATGGCAGGGTTTTGGAAGGCGACAGGAAGAGACAAATCGGTGTATGAAAGCATCAAACTTATTGGCATGAGAAAGACCCTCGTTTTCTACAAAGGAAGAGCCCCTAATGGACAAAAAACTGATTGGATCATGCACGAGTATAGGCTTGAAACCGTTGAGAATGGACCTCCACAGGAGGAAGGATGGGTGaggttttcagcagctcAAAATTTCCTGTACAAGCAAGAAGAGATCATAGAAGAAGGTAATAATAATTTGAGCTTCATGCATGCAGAACAACATTTGGTGCAGCTTCCTCAGCTAGAAAGTCCTTCTTTGCCACTAGCAAAGAAGCAAAGCTCAGTAATGTCCCTAATAGCAGAGAATATTATTAATAACGAAGATATTGATAATATTTCTCAAAAGGGTTTATCCCACAACACTGCAAAGAAAGTGACTACTGATTGGAGAGCTCTTGACAAGTTTGTGGCTTCTCAGTTGAGTCATGAAGAGAGGCATGAATTAATAGGTGTGTCAAGCTTTGCAACTCATCACACTACTACTAGCTCGGACATGGCATTGTTGCTACTGCAGAATAATAGTAGGGAAAATGAAAGGAATTACAAGTTCAACCCGTTTTTGAATACAAGCTCAACATCAGACTGTGACATTGGGATATGCGTATTTGAAAAATGA 930 0.3688 MMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIKEIDLYRIEPWDLQEICRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYESIKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLETVENGPPQEEGWVRFSAAQNFLYKQEEIIEEGNNNLSFMHAEQHLVQLPQLESPSLPLAKKQSSVMSLIAENIINNEDIDNISQKGLSHNTAKKVTTDWRALDKFVASQLSHEERHELIGVSSFATHHTTTSSDMALLLLQNNSRENERNYKFNPFLNTSSTSDCDIGICVFEK 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00456 309 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 4 149 - -
Gma02g00456 309 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 167 284 - -
Gma02g00456 309 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 149 - -
Gma02g00456 309 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 167 284 - -
Gma02g00456 309 Gene3D NAC domain 15 155 IPR036093 GO:0003677|GO:0006355
Gma02g00456 309 Pfam No apical meristem (NAM) protein 7 134 IPR003441 GO:0003677|GO:0006355
Gma02g00456 309 SUPERFAMILY NAC domain 3 139 IPR036093 GO:0003677|GO:0006355
Gma02g00456 309 ProSiteProfiles NAC domain profile. 6 155 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00456 Gma-Chr2 4583994 4587136 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00456 2 308 NAC Transcription Factor Family AT2G18060 53.784 1.31e-122 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma02g00456 NAM 1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00456 - - gmx:100797578 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00456 02 4583994 4587136 Gma02g00456 02 4583994 4587136 ECH
Gma16g01217 16 29900547 29904038 Gma02g00456 02 4583994 4587136 GST
Gma11g00685 11 5740021 5742465 Gma02g00456 02 4583994 4587136 PCT
Gma02g00456 02 4583994 4587136 Gma11g00685 11 5740021 5742465 PCT