Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00449 ATGGCCATCAAAAAATCCAATAAGCTACCCCAAGCAGATGTGATAAAGCAAATTGTGAGAAGGTGTTCAAGCTTTGGGAAGAAGCAGCAACAGGGCTACAATGAAGAGGGTGGTCTTCCAGAAGATGTGCCAAAAGGGCACTTTGCAGTGTATGTTGGTGAAAACAGGACAAGATACATTGTCCCAATTTCATGGTTGGCTCATCCACAATTTCAAAGCTTGCTCCAAAGAGCTGAGGAGGAGTTTGGCTTCAATCATGACATGGGCCTTACAATCCCATGTGATGAAGTTGTTTTTGAGTTTCTTACCTCAATGATTAGATGA 324 0.4259 MAIKKSNKLPQADVIKQIVRRCSSFGKKQQQGYNEEGGLPEDVPKGHFAVYVGENRTRYIVPISWLAHPQFQSLLQRAEEEFGFNHDMGLTIPCDEVVFEFLTSMIR 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00449 107 Pfam Auxin responsive protein 27 106 IPR003676 GO:0009733
Gma02g00449 107 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 7 107 - -
Gma02g00449 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00449 Gma-Chr2 4524419 4524995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00449 40 106 Calmodulin-binding Proteins AT3G43120 50.746 1.14e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00449 K14488 - gmx:100527235 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00449 02 4524419 4524995 Gma16g01211 16 29808105 29808544 ECH
Gma04g00238 04 2056145 2056770 Gma02g00449 02 4524419 4524995 ECH
Gma16g01211 16 29808105 29808544 Gma02g00449 02 4524419 4524995 ECH
Gma02g00449 02 4524419 4524995 Gma02g00449 02 4524419 4524995 ECH