Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00441 ATGGGAGCCTGCTTTTCCGCCACCAAAGTAAGCGGCTCGAACGGCAATGGCGTCAACGTCAACAAAAAGCGCAGGGGGACCACGAAGAAGCCGAAATCAGAGACGGCGAAGGCGAATCCCCAACGGCACAAGGCGGCAAGTTCGCGCCACGTGCCGTGCGGGAAGCGCACCGATTTCGGTTACAAGAAGGATTTCAATCAGCGTTACTCGCTCGGAAAATTGCTCGGACACGGCCAATTTGGTTACACTTACGTTGGAATTGACAAAGCCAATGGCGATCGCGTCGCCGTTAAGAGGCTTGAGAAGAGTAAGATGGTTCTGCCTATTGCCGTTGAGGATGTTAAGCGAGAGGTCAAGATATTGAAAGCACTTACCGGCCATGAGAATGTGGTTCAGTTCTATAATGCTTTTGAAGATGATTCTTATGTGTTCATAGTTATGGAGTTGTGCGAGGGTGGAGAACTGCTAGATCGGATATTGGCCAAGAAGGACGGTCGTTATACTGAAAAAGACTCAGCGGTGGTTGTAAGGCAGATGCTCAAGGTTGCAGCTGAGTGTCATTTACATGGTTTGGTACACCGGGATATGAAACCAGAGAATTTTCTTTTTAAATCAATCAAAGAAGATTCACCTTTAAAGGCCACAGATTTTGGTTTGTCAGATTTCATAAAACCTGGAAAAAAGTTTCATGATATTGTTGGCAGTGCTTACTATGTTGCACCTGAAGTGTTAAAACGCAAGTCAGGTCCTCAATCAGATGTGTGGAGTATTGGTGTTATTACATACATATTGTTGTGTGGAAGACGCCCATTTTGGGATAAGACTGAGGATGGTATCTTCAAGGAGGTCTTACGTAAGAAGCCTGATTTTCATCGGAAACCATGGCCAACTATTAGTAATGCCGCAAAAGATTTTTTGAAAAGATTACTAGTAAAGGATCCTCGGGCGAGATTAACTGCGGCTCAAGGTTTATCACATCCATGGGTTAGAGAAGGAGGTGAAGCATTGGAGATTCCTATTGATATATCTGTCCTCAGCAACATGCGGCAGTTTGTGAAATATAGTCGAATGAAACAATTTGCACTGAGGACATTGGCTAGCACACTTAATGAAGAAGAGTTGGCTGATATAAAAGATCAATTTGATGCTATAGATGTGGACAAAAATGGTTCTATTAGCCTGGAAGAGATGAGACAGGCTCTTGCCAAAGATCTTCCTTGGAAATTGAAAGAATCACGTGTACTAGAGATATTGCAAGCGATAGACAGCAACACTGATGGCCTAGTGGATTTCCGGGAGTTTGTAGCGGCTACATTACACGTGCATCAACTGGAGGAAGACTCTGACAAGTGGCAGCAACTGTCACAGGCTGCTTTTGAGAAATTTGACATAGATAAAGATGGCTATATTACTACGGAAGAACTTAGAATGCATACATGCTTGAGAGGCTCCGTTGATCCTTTGCTAGAGGAAGCTGATATTGACAAAGATGGAAAAATAAGCCTACCAGAGTTTCCCCATCTGTTCATCGGCGGCGGAGATTCTAGATTAGAGATTTTAGCCACTCATCCATGCTGA 1578 0.4411 MGACFSATKVSGSNGNGVNVNKKRRGTTKKPKSETAKANPQRHKAASSRHVPCGKRTDFGYKKDFNQRYSLGKLLGHGQFGYTYVGIDKANGDRVAVKRLEKSKMVLPIAVEDVKREVKILKALTGHENVVQFYNAFEDDSYVFIVMELCEGGELLDRILAKKDGRYTEKDSAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSIKEDSPLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRKSGPQSDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRKKPDFHRKPWPTISNAAKDFLKRLLVKDPRARLTAAQGLSHPWVREGGEALEIPIDISVLSNMRQFVKYSRMKQFALRTLASTLNEEELADIKDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDSNTDGLVDFREFVAATLHVHQLEEDSDKWQQLSQAAFEKFDIDKDGYITTEELRMHTCLRGSVDPLLEEADIDKDGKISLPEFPHLFIGGGDSRLEILATHPC 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00441 525 ProSitePatterns EF-hand calcium-binding domain. 493 505 IPR018247 -
Gma02g00441 525 Gene3D Phosphorylase Kinase; domain 1 62 154 - -
Gma02g00441 525 ProSitePatterns EF-hand calcium-binding domain. 385 397 IPR018247 -
Gma02g00441 525 SUPERFAMILY EF-hand 354 509 IPR011992 -
Gma02g00441 525 Pfam Protein kinase domain 69 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g00441 525 ProSitePatterns EF-hand calcium-binding domain. 422 434 IPR018247 -
Gma02g00441 525 ProSiteProfiles EF-hand calcium-binding domain profile. 372 407 IPR002048 GO:0005509
Gma02g00441 525 MobiDBLite consensus disorder prediction 1 55 - -
Gma02g00441 525 CDD STKc_CAMK 68 328 - -
Gma02g00441 525 Gene3D - 355 506 - -
Gma02g00441 525 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Gma02g00441 525 Pfam EF-hand domain pair 376 438 IPR002048 GO:0005509
Gma02g00441 525 Pfam EF-hand domain pair 457 507 IPR002048 GO:0005509
Gma02g00441 525 SMART serkin_6 69 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g00441 525 SMART efh_1 484 512 IPR002048 GO:0005509
Gma02g00441 525 SMART efh_1 454 480 IPR002048 GO:0005509
Gma02g00441 525 SMART efh_1 376 404 IPR002048 GO:0005509
Gma02g00441 525 SMART efh_1 413 441 IPR002048 GO:0005509
Gma02g00441 525 PANTHER SERINE/THREONINE-PROTEIN KINASE 29 507 - -
Gma02g00441 525 MobiDBLite consensus disorder prediction 7 22 - -
Gma02g00441 525 ProSiteProfiles EF-hand calcium-binding domain profile. 450 485 IPR002048 GO:0005509
Gma02g00441 525 SUPERFAMILY Protein kinase-like (PK-like) 66 345 IPR011009 -
Gma02g00441 525 Gene3D Transferase(Phosphotransferase) domain 1 155 335 - -
Gma02g00441 525 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 16 29 507 - -
Gma02g00441 525 ProSiteProfiles Protein kinase domain profile. 69 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g00441 525 Gene3D - 345 439 - -
Gma02g00441 525 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Gma02g00441 525 ProSiteProfiles EF-hand calcium-binding domain profile. 409 444 IPR002048 GO:0005509
Gma02g00441 525 ProSitePatterns EF-hand calcium-binding domain. 463 475 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00441 Gma-Chr2 4473423 4479091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00441 1 509 EF-hand Containing Proteins AT2G17890 73.953 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gma02g00441 Pkinase 8.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00441 K13412 - gmx:100781666 1004.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00441 02 4473423 4479091 Gma02g00441 02 4473423 4479091 ECH