Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00438 ATGTGCAAAAGATTGGTTTTTCACTTGAATACCAACCCAAACAGAGCACAATCACAGAAGCACAGTTATGGTGGGACCCACACCTTCTCTCCATTTTCACTCTCCCTCTTTATATACGAAACCCAATCTTCCTCCAAATCCAAAGCCTCAAACAACAACGACGTATCATACCATAACATGTTCACAGCACATTTTCCTACATTCACCGCCACTTTATCCGGTAAAAGGGTCTCCTCGCCGCCGCGCCAAGTCAGATTCCGGTTAACAGTGTCCTTCGCCATCGCCACTTGCACGGAGGAGCAACGACATAAGACAGCTTCGTATTTGGGCCCTCATCACGGTATGGCTTCGTGCGCGATGCTGTACGAGATTCTGGGGATCCGCGCCGCCGCGTCCGGCATGGAAATCAAGGCGGCGTACCGGTGGCTGGCGAGGATGTGCCACCCCGACGTGGCACCGATGGAGCGAAAGGAATCCTCTGCGAGCGAGTTCATGAAGATCCATGTTGCGTACTGCACGCTCTTGGACCCCGAGAAGCGCGCCAGCTCCGATCGAAGCTTGTTCCGGCGCCACCAGCGACCGCTCACAACGACGTCGTCGGGGGGTTCCAGTTGA 615 0.5447 MCKRLVFHLNTNPNRAQSQKHSYGGTHTFSPFSLSLFIYETQSSSKSKASNNNDVSYHNMFTAHFPTFTATLSGKRVSSPPRQVRFRLTVSFAIATCTEEQRHKTASYLGPHHGMASCAMLYEILGIRAAASGMEIKAAYRWLARMCHPDVAPMERKESSASEFMKIHVAYCTLLDPEKRASSDRSLFRRHQRPLTTTSSGGSS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00438 204 SMART dnaj_3 119 179 IPR001623 -
Gma02g00438 204 Pfam DnaJ domain 121 183 IPR001623 -
Gma02g00438 204 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 60 203 - -
Gma02g00438 204 CDD DnaJ 122 176 IPR001623 -
Gma02g00438 204 SUPERFAMILY Chaperone J-domain 120 188 IPR036869 -
Gma02g00438 204 MobiDBLite consensus disorder prediction 181 204 - -
Gma02g00438 204 ProSiteProfiles dnaJ domain profile. 120 187 IPR001623 -
Gma02g00438 204 PANTHER DNAJ PROTEIN HOMOLOG-LIKE 60 203 - -
Gma02g00438 204 Gene3D DnaJ domain 112 200 IPR036869 -
Gma02g00438 204 PRINTS DnaJ domain signature 122 140 IPR001623 -
Gma02g00438 204 PRINTS DnaJ domain signature 140 155 IPR001623 -
Gma02g00438 204 PRINTS DnaJ domain signature 159 179 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00438 Gma-Chr2 4452199 4452813 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00438 - - gmx:100780051 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00438 02 4452199 4452813 Gma02g00438 02 4452199 4452813 ECH
Gma02g00438 02 4452199 4452813 Gma16g01191 16 29529837 29530834 ECH
Gma12g00291 12 2309127 2309984 Gma02g00438 02 4452199 4452813 ECH