Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00383 ATGTCTCATCTGAGCCACAAGACCTTGGTTTATCTTCCTGAAATGAGGCCTGAACATGAAGCTGAGGAAGGCCAAGCCAATAGTCTTAGTTCCATTTCTTCTTGGCCTCATCGTTTGGAGAATGTTTTCCCTGTTTATGCCATGGGAACTTCCAACCCTGTCTTGAATTCTTCACTTCACATTTCGGATTGTCTTGATCCTATTTGGGATGTTGTCAGAGAAGAAGCCAAGTTAGAGGCAGAAAAGGAGCCAATATTAAGCAGCTTCTTCCATGCCACTATTCTATCTCATGATTGCTTGGAGGAAGCATTGGCTTTTGCTCTTGCCAACCGTCTCCAAAAGCCTACTCTTTTGGCTACTCAGCTTATGGATATATTTTCTAATGTGATGAAGCATGATAAAGGTATCCAACAATCGATTCGCTTGGATATTCAGGCATTTAAAGATCGGAATCCTGCTTGTTTGTTATATTGCTCAGCACTTTTATTTATGAAGGGTTACCAGTCTTTGCAAGTATATCGAGTAGCTCACGCTTTGTGGAGGCAGGGACGCAAGGTTTTGGCCGCAGCTTTGCAAAGTCGAGTTAGTGAGGTAGTGCTTGCACTTGGTAAAAAAAATGGAGAAATACTACACAAGGCTGCGAAAATTGGGGATGGAATCTTAGTAGATCATGGGACAGGTGTTGTTATTGGTGAAACAGTTATTGTTGGAAGCAGAGTTTCATTGATGCAAGGTGTAACTTTAGGTGGCACGGTAAAGGAAACAGGTGATCGGCATCCCAAAATTTCTGAAGGTGTGCTAATTGGAGCTCATGCAACTATACTTGGGAATATAAGAATTGGTGAATGTGTGATGATAGCTGCTGGCTCTCTTGTGTTACAAGAGGTCCCTCCTCACAGCATTGTGGCTGGTGTACCAGCAAAGGTTATTGGAAGAGTACATGAGCATTATCCATCCTTAACCATGCAGCAAGGTATATAA 981 0.4251 MSHLSHKTLVYLPEMRPEHEAEEGQANSLSSISSWPHRLENVFPVYAMGTSNPVLNSSLHISDCLDPIWDVVREEAKLEAEKEPILSSFFHATILSHDCLEEALAFALANRLQKPTLLATQLMDIFSNVMKHDKGIQQSIRLDIQAFKDRNPACLLYCSALLFMKGYQSLQVYRVAHALWRQGRKVLAAALQSRVSEVVLALGKKNGEILHKAAKIGDGILVDHGTGVVIGETVIVGSRVSLMQGVTLGGTVKETGDRHPKISEGVLIGAHATILGNIRIGECVMIAAGSLVLQEVPPHSIVAGVPAKVIGRVHEHYPSLTMQQGI 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00383 326 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 268 296 IPR018357 GO:0016740
Gma02g00383 326 SMART SATase_N_2_a 68 172 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gma02g00383 326 Gene3D Hexapeptide repeat proteins 210 326 - -
Gma02g00383 326 Pfam Serine acetyltransferase, N-terminal 68 171 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gma02g00383 326 Pfam Bacterial transferase hexapeptide (six repeats) 259 292 IPR001451 -
Gma02g00383 326 Gene3D serine acetyltransferase, domain 1 52 200 IPR042122 -
Gma02g00383 326 PANTHER SERINE ACETYLTRANSFERASE 2-RELATED 7 324 - -
Gma02g00383 326 CDD LbH_SAT 210 306 IPR045304 -
Gma02g00383 326 SUPERFAMILY Trimeric LpxA-like enzymes 68 323 IPR011004 -
Gma02g00383 326 PANTHER SERINE ACETYLTRANSFERASE 7 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00383 Gma-Chr2 3996898 4000407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00383 39 324 Miscellaneous Gene Families AT2G17640 65.385 1.75e-121 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00383 K00640 - gmx:100812677 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00383 02 3996898 4000407 Gma02g00383 02 3996898 4000407 ECH
Gma16g01114 16 27992961 27996915 Gma02g00383 02 3996898 4000407 GST
Gma01g01639 01 52119537 52122745 Gma02g00383 02 3996898 4000407 PCT
Gma11g00767 11 6418684 6423674 Gma02g00383 02 3996898 4000407 PCT
Gma02g00383 02 3996898 4000407 Gma01g00118 01 1338507 1340350 PCT
Gma02g00383 02 3996898 4000407 Gma09g01938 09 45007074 45008993 PCT