Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00381 ATGGCATCCTCATCTTCTTGTCATGTTACTGAAATAAAACatgatgtctttatcagctttagaggtacagacgtccgcaaaggtctgcttagccatttgaaaaccgaattgcgccgcagacagattgatgcctatgtggatgagagacttgacagaggagatgaaatatcatcctcacttctcagagcaattgaagaatcacaaatttcattggtcatattctcaaaagactatgcttcatcacagtggtgcttggaagagcttgccaaaatgattgaatccatggaaataaataaacagattgtactacctgttttcttcaatgtagatccatcacatgtgcggcaccaatgtggagattatggagatgctttagctaaacatgaagaaAAACTCAAGGAAAACATGCTCAAGGTAAAGACCTGGAGATCTGCTATGAAAAAAGCGGCTGATTTATCAGGGTTTCATTACCCAACCAATTTTGAGGATGAATCAGATCTTGTCCATGGAATCGTCGAAGACATTTGGGAAAAATTGAGCAAGTTTTGCCCACGTGAATCAAATGGTCTTGTTGGAATTGATCAAAACATTGCACGGATTCAGTCCTTATTGTTAATGGaatcaagtgaagttctttttgttggaatttggggcatgggtggcataggtaagacaaccattgcccgtgctgtttttgataaattttcttctcaatacgatggtttatgcttcttgaatgtaaaagaagagttggaacaacatggattgagtcttttacgagagaaacttatatctgaactatttgagggagaaggactccatacaagtggcacaagcaaagcaagattcttgaattcttctatcagaaggatgggtcggaaaaaagttctggttgtgctcgatgatgtaaatacttctgaacaaataaaagatcttgttggcgaaccaacttgctttggtgcagggagtagagtgatcataacaagtagagatcagaatgtgcttacgagtgggggtgttcaccaaattcatgaggtcaaggaaatggactcgcgagattccctcaaactcttttgcttaaatgccttcaatgaaagccaacctaaaatgggatatgaaaaactaactgaagaggtagttaaaatagcccagggcattcctttagctttaagagttttaggtgcagatttccgttccagaagcactatagacatgtgggagtctgcattaagcaaaatcaagaagtatcccaacaagaaaattcagagtgtgttacgattcagttttgatggactggaagaattagagaaaaaggcatttctagatattgcattctttttcgaagaagacagcaaagactacgttattacgcaactggatgcttggggattttatggtgctgtagggatagaggttctccaacgaaaagctctgataacaatttcaaaagacaacagaatacaaatgcatgacttgacacgacaaatgggttgcgaaatagttcgtcaagaatctattaccaatccaggaagacgcagccgattgcgggatagtgaggaagtatacaatgtattgagacaTGAGCAGGGAACTGATGAGGTGGAAGCCATGCAAATAGATGTGTCTCAAGCTATAGATTTACGCCTGGAATTAAGCACTTTTAAGAAGTTCTCAAACTTTAAAAAGATGCCTCGTCTAAGATTTCTCAAATTTTATCTCCCACTGGATCCTGAGACTGAGCGTTCATTGATGCCGCCAAGCCACGATGGAAACTTTTGGTATTTAGGATGTCAAGTTCCGTTGCTATTATCTGTAGGATGCAAAGAACTCATGACAGTTGCAAGCGAGATTCACGTAAAATGTGTCTACTACCATTTTATTGATGGCTGCTCAGATCCTTCACGACTGAACGAACTTTTAGAAACATCAACAAACTTTGGATGCTATGCAGTGGAAACACTATTGAGGTTATCCATGACGTTGAACGCATCCACTGGGCACCTCAGGAATCTTGAAAGCTCAGATATGCTTGATCAACAATTTTTGACTATGCCTGATGAGCTAATTTGCTTGAGATCTACGTATTATGTTAAGCTTTACAAGAAGACCACGGGACAAGACACCAAGTTACACATTCTATTTGATGGATTTAGGTTTTATGAACGAGTATCTGCCAGGGAGTTGGATAAGGCAGCTGGTGTCCGGGGTGGTATGATGCTGATTCTTTACTGTACAGCTGCTCTCTTTCTATTCCAACTCTTAGAGAGACCCAGGCAGGGTTGGGGGACATTGAGAAAAGGATTGCTCTGGATAGGGATTGTAGCTTTGATCACATATCTGTtgatgaggacatga 2355 0.1796 MASSSSCHVTEIKHDVFISFRGTDVRKGLLSHLKTELRRRQIDAYVDERLDRGDEISSSLLRAIEESQISLVIFSKDYASSQWCLEELAKMIESMEINKQIVLPVFFNVDPSHVRHQCGDYGDALAKHEEKLKENMLKVKTWRSAMKKAADLSGFHYPTNFEDESDLVHGIVEDIWEKLSKFCPRESNGLVGIDQNIARIQSLLLMESSEVLFVGIWGMGGIGKTTIARAVFDKFSSQYDGLCFLNVKEELEQHGLSLLREKLISELFEGEGLHTSGTSKARFLNSSIRRMGRKKVLVVLDDVNTSEQIKDLVGEPTCFGAGSRVIITSRDQNVLTSGGVHQIHEVKEMDSRDSLKLFCLNAFNESQPKMGYEKLTEEVVKIAQGIPLALRVLGADFRSRSTIDMWESALSKIKKYPNKKIQSVLRFSFDGLEELEKKAFLDIAFFFEEDSKDYVITQLDAWGFYGAVGIEVLQRKALITISKDNRIQMHDLTRQMGCEIVRQESITNPGRRSRLRDSEEVYNVLRHEQGTDEVEAMQIDVSQAIDLRLELSTFKKFSNFKKMPRLRFLKFYLPLDPETERSLMPPSHDGNFWYLGCQVPLLLSVGCKELMTVASEIHVKCVYYHFIDGCSDPSRLNELLETSTNFGCYAVETLLRLSMTLNASTGHLRNLESSDMLDQQFLTMPDELICLRSTYYVKLYKKTTGQDTKLHILFDGFRFYERVSARELDKAAGVRGGMMLILYCTAALFLFQLLERPRQGWGTLRKGLLWIGIVALITYLLMRT 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00381 784 SUPERFAMILY "Winged helix" DNA-binding domain 419 525 IPR036390 -
Gma02g00381 784 SMART till_3 13 152 IPR000157 GO:0007165
Gma02g00381 784 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 576 IPR044974 GO:0006952
Gma02g00381 784 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Gma02g00381 784 Gene3D - 8 179 IPR035897 -
Gma02g00381 784 Pfam TIR domain 13 189 IPR000157 GO:0007165
Gma02g00381 784 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 155 IPR035897 -
Gma02g00381 784 Pfam NB-ARC domain 195 421 IPR002182 GO:0043531
Gma02g00381 784 Gene3D - 180 341 IPR027417 -
Gma02g00381 784 Gene3D - 349 433 IPR042197 -
Gma02g00381 784 PRINTS Disease resistance protein signature 383 397 - -
Gma02g00381 784 PRINTS Disease resistance protein signature 290 304 - -
Gma02g00381 784 PRINTS Disease resistance protein signature 213 228 - -
Gma02g00381 784 PANTHER NB-ARC DOMAIN PROTEIN 12 576 - -
Gma02g00381 784 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 443 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00381 Gma-Chr2 3983901 3987227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00381 14 572 WRKY Transcription Factor Family AT4G12020 31.915 3.99e-66 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00381 - - gmx:100812128 1555.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01113 16 27965018 27968610 Gma02g00381 02 3983901 3987227 GST