Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma02g00375 | ATGGATCCGCTCAGGGGATCCGAACCCGAAAACCCTACCGCCACGTGTCTCTCCATGCTCTCCCTCCGCCGCTTCTCCGCGTGCCGTGACTTCGCCCGTCGCCTCCCTCCCTCCGACTTCGTCGCCCGCGTCCTCGCCGTAGCCGACGTCCTCTCCGCCTCCGACTTCTACTCCGTCCTCCAGCTCCGCCCTTCTGACGGCGGCAACCGCGACCTCGCGCGGCGGCAGTACGCAAAACTCGCACTCCTCCTCGACCCAACGAACCCCGATAAGCTCCCGTTCTCCGACGAGGCCCTCGCACGTGTTCAGGAGGCCTGGCACGTGCTCTCCCACCCCGAACGCCGCACCCGCCACGACCGCGAGCAAAACGCAAACGCAAACCCTAGGAGGACGACGACGTCGTTTTGGACCGCGTGCCCCTACTGCTGGAACCTCTTCGAGTACGAGAAAAGGTACGAGGATTGCGCGCTGTTGTGCCAAGTCTGCGGGAAGGCCTTCCAGGGCGTGCCTGTGAAGCCGCCAACCAAGACGGGCGACGCCGTCGTGGAGGGTGAGGAGCTCCGGCAGTACTACTCGTGTGAAGCGAGTGTGCCATTGATGTATTACGAGGTTAAGGGGTTGCAACAAGGCATTCGTGAGAAGAGGAGGATGAGGGTGAAGACTGTGGCGAACAAGGTTGCTGGAAACAGGAGGAGGAGGCCGATCGATGGCGGCGACTCGGATTTCGATTTGGATGTGGAAGATGGGGAGTTGGAGTTCACGGAAGGGGATGATGATGCCTTTGTTGGTTTGAAGTTTGACTAG | 804 | 0.6144 | MDPLRGSEPENPTATCLSMLSLRRFSACRDFARRLPPSDFVARVLAVADVLSASDFYSVLQLRPSDGGNRDLARRQYAKLALLLDPTNPDKLPFSDEALARVQEAWHVLSHPERRTRHDREQNANANPRRTTTSFWTACPYCWNLFEYEKRYEDCALLCQVCGKAFQGVPVKPPTKTGDAVVEGEELRQYYSCEASVPLMYYEVKGLQQGIREKRRMRVKTVANKVAGNRRRRPIDGGDSDFDLDVEDGELEFTEGDDDAFVGLKFD | 267 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma02g00375 | 267 | ProSiteProfiles | dnaJ domain profile. | 55 | 122 | IPR001623 | - | |
| Gma02g00375 | 267 | Pfam | DnaJ domain | 55 | 119 | IPR001623 | - | |
| Gma02g00375 | 267 | PANTHER | CHAPERONE DNAJ-DOMAIN PROTEIN | 212 | 267 | - | - | |
| Gma02g00375 | 267 | PANTHER | CHAPERONE DNAJ-DOMAIN PROTEIN | 1 | 208 | - | - | |
| Gma02g00375 | 267 | PANTHER | CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN | 1 | 208 | - | - | |
| Gma02g00375 | 267 | SUPERFAMILY | Chaperone J-domain | 47 | 122 | IPR036869 | - | |
| Gma02g00375 | 267 | SMART | dnaj_3 | 54 | 114 | IPR001623 | - | |
| Gma02g00375 | 267 | CDD | DnaJ | 55 | 110 | IPR001623 | - | |
| Gma02g00375 | 267 | Gene3D | DnaJ domain | 48 | 136 | IPR036869 | - | |
| Gma02g00375 | 267 | PANTHER | CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN | 212 | 267 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gma02g00375 | Gma-Chr2 | 3904841 | 3905734 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gma02g00375 | 7 | 211 | SUVH1 or 3-interacting DNAJ domain-containing protein superfamily | AT2G01710 | 29.958 | 8.81e-26 | 102 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma02g00375 | - | - | gsj:114406356 | 412.535 |