Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00373 ATGCAACATGTTCGAAATTACTACAACTCGGAGGCTCAAATGATGAGAAGTAGCTTTTCTCAGCCATTCATCTCTAGAACATACAAAACCAGTTTCTTGAAGCCAAAATCAAAGGCAGAGATCAAAGTATTGGCTGCTAAGAAACACAGTGAAGCAGAAAAGAGACGTAGAATGAGAATCAATGGTCAATATGAAACCCTCCGAAATATCCTCCCCAACATAATCAAAGTAAGTGCCCGACACAAGTATCAAACAAAGGACAAGGCATCAGTATTGGCAGAGACTATAAAGCAAGTGAAGGAGCTGAAGAAAAAGGTGTCAAAACTGGAACAAGATAGTTCTACTAATCCATCAAAGGATGTTGTTAAGTTTCCTAGTGGGGCAGAAAAGTTGCGTTTGGAAAGATGTAACATTGAGGAGGGCCTAGTGAAGGCCACATTGAGTTGTGAGGATCGTCCAGAATTGATGCAATTAATATCAAAGGCAGTAGGGTCAGCCAACACAAAATTGGTAAAGGCTGAGATAGTGAGTGTGGGAGGGAGAACCAGAAGTGTGTTGTGGGTGCAAGGTCTTGGAAATGATGGTATGGGGATGCTCAAGAGCCATTTGAGGACTGCATTGCACAAGCCGCGTTCTTTTCAGTAA 645 0.4217 MQHVRNYYNSEAQMMRSSFSQPFISRTYKTSFLKPKSKAEIKVLAAKKHSEAEKRRRMRINGQYETLRNILPNIIKVSARHKYQTKDKASVLAETIKQVKELKKKVSKLEQDSSTNPSKDVVKFPSGAEKLRLERCNIEEGLVKATLSCEDRPELMQLISKAVGSANTKLVKAEIVSVGGRTRSVLWVQGLGNDGMGMLKSHLRTALHKPRSFQ 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00373 214 CDD ACT_UUR-ACR-like 146 207 - -
Gma02g00373 214 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 44 102 IPR011598 GO:0046983
Gma02g00373 214 PANTHER TRANSCRIPTION FACTOR BHLH131 2 211 - -
Gma02g00373 214 SMART finulus 50 108 IPR011598 GO:0046983
Gma02g00373 214 Coils Coil 92 112 - -
Gma02g00373 214 PANTHER TRANSCRIPTION FACTOR BHLH30 2 211 IPR045847 GO:0003700|GO:0006355
Gma02g00373 214 Gene3D - 45 121 IPR036638 GO:0046983
Gma02g00373 214 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 36 112 IPR036638 GO:0046983
Gma02g00373 214 Pfam Helix-loop-helix DNA-binding domain 48 102 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00373 Gma-Chr2 3897298 3898298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00373 40 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G25710 39.216 1.95e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma02g00373 HLH 1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00373 - - gmx:102662951 382.874