Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00363 ATGGAATTCGAGGATCAAGAGGAGCAGGAGGAGGAGCTGTGTATGGGTGGCGGCGGAGCGGGTTACGACCCGACCCGGATGAAGGTTCCGGTAGCGGCGGAGCCGGTAAGGAGCACCAACGGCGGcggcggaagggcgaggtacagggagtgtttgaagaaccacgccgttgggatcggaggccacgcgcttgacggttgcggcgagtttatggcggcggggatggagggcacccttgacgcgttgaaatgcgccgcgtgcagctgccaccgcaactttcaccgtaaggaggcggattcctccgccgtggtcgccttctccggcggggacccgtacttaattccccaccaccacccgccgccgcagtttgcggcgtactaccgtcatccggcggggtatctccacgtggcgggacagcagcaccgttcggcggtgggggggacgctggcgctgccgtcgacgtccggcggcggcggaactcagagcacgcgtgaggaccaggaagacatttcgaacaatccgagtgcaggaggaacagggtccaagaaacggttcagaacaaaattcactgtggagcaaaaggagaaaatgcttgaacttgctgaaaaactagggtggaggattcagaaacaggacgaggctgtggtccaagccttctgcaacgaaaccggtgtcaagcgtcacgttctcaaggtttggatgcataacaacaagcacaccctcgTTTGTTACAACGGTGGTGTAGTGACGCGTTTGGAACCTTTTTTTTCGGGTGGATGA 780 0.1346 MEFEDQEEQEEELCMGGGGAGYDPTRMKVPVAAEPVRSTNGGGGRARYRECLKNHAVGIGGHALDGCGEFMAAGMEGTLDALKCAACSCHRNFHRKEADSSAVVAFSGGDPYLIPHHHPPPQFAAYYRHPAGYLHVAGQQHRSAVGGTLALPSTSGGGGTQSTREDQEDISNNPSAGGTGSKKRFRTKFTVEQKEKMLELAEKLGWRIQKQDEAVVQAFCNETGVKRHVLKVWMHNNKHTLVCYNGGVVTRLEPFFSGG 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00363 259 Gene3D - 167 243 - -
Gma02g00363 259 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 33 241 - -
Gma02g00363 259 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 48 97 IPR006456 -
Gma02g00363 259 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 33 241 - -
Gma02g00363 259 MobiDBLite consensus disorder prediction 147 180 - -
Gma02g00363 259 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 182 238 IPR006455 -
Gma02g00363 259 SUPERFAMILY Homeodomain-like 173 240 IPR009057 -
Gma02g00363 259 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 47 97 IPR006456 -
Gma02g00363 259 MobiDBLite consensus disorder prediction 147 184 - -
Gma02g00363 259 Pfam ZF-HD protein dimerisation region 46 98 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00363 Gma-Chr2 3815955 3817008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00363 1 253 ZF-HD Transcription Factor Family AT4G24660 49.612 1.77e-67 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Gma02g00363 ZF-HD_dimer 2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00363 - - gmx:100808910 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00363 02 3815955 3817008 Gma02g00363 02 3815955 3817008 ECH