Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00333 ATGTCCTTCGCATCATTTTTTCTTATCTTCCTTTGTTACCATGCACTTCCTGCTCTTGCTGATCCAAGAGCCACAGAGGTAGCAGTGTTGTGCACCAACACAACAGCACCAATGCCTCAGAGACAAGCTTTCTTAACAAACTTCTATGATGCCTTGGAAGCCTTAACCGCTTTGGTTACAAGGCAAAAGTATGCTTTTGTTGTTAAAGGGACTACTCAAAATAATGCCACTGTCTATGCTTTTGGTGAGTGCAGGAAAGATCTTACAAAACCAGATTGTGATGTGTGCTTTGCACAGTGCAAGACACGTGTCCTTAGGTGCTCTCCATTTCAGAGAGGCATTGATGGTGGCATGTTTTTCTTTGATGGATGCTTTCTTAGGTATGATGGCTACAACTTCTTCAATGAGAGTCTTAGTCCTCAGGACTTTACTGTTTGTGGAACCGAAGATTTTAGTGGGAATTGGAGTGTGTATAAGGCCAATACTGTGGAGTTGGTGAGAAATTTGAGCATTGAAGCACCTAAGAATGAAGGGTTCTTTGTGGGGTATGTGAGTCAAAGGAATGTGACTGTTTATGGGTTGGCTCAATGCTGGAAGTTTATGAATGGCAGTGCTTGTCAGAACTGTTTGGTTGAAGCTGTCACTAGGATTGATTCTTGTGCTTCAAAAGCAGAAGGGAAGGCATTGAATGCTGGATGTTACTTGAGGTATTCCACACACAATTTCTATAATAGTTCAAACAACAATGTTCCTCATGAAAATCAAGGACACAAAAATCTTGCTATAATTGTGGCTGTAGCATCTGCTTCCCTGGCTCTTCTGCTGATTGTTGCAACCGTGGTTTTCTTTGTGAGGACAAATTTACTGAAGCGGAGGAGAGAAAGAAGACAATTTGGTGCACTTTTGAACACGGTGAACAAGTCCAAACTAAATATGCCATATGAAATTCTTGAAAAGGCCACAGATTACTTCAGTCATTCCAATAAGCTAGGAGAAGGGGGATCTGGATCAGTTTATAAAGGAGTTCTGCCAGATGGAAATACCATGGCTATAAAAAGGCTTAGCTTTAACACATCACAATGGGCAGATCATTTCTTCAATGAGGTCAACTTGATCAGTGGCATTCATCACAAAAATCTAGTGAAGCTTTTAGGGTGCAGCATTACAGGACCTGAAAGCCTTCTTGTTTATGAATTTGTGCCTAATCACAGCCTCTATGATCACCTATCTGGTAGAAAGAATTCTCAACAGTTGACATGGGAAGTCAGGCATAAAATCATATTGGGAACAGCTGAGGGCTTGGCCTATCTTCATGAGGAATCACAGAGAATCATTCATAGGGATATAAAATTAGCCAACATTCTCGTTGATGATAACTTCACACCCAAGATTGCTGATTTTGGACTTGCCAGATTATTTCCAGAAGACAAGTCTCACCTTAGCACAGCCATTTGTGGCACATTgggttatatggctccagaatatgtagtgttagggaagttaactgagaaagcagatgtgtacagttttggggttctaataatggaaattatatccggcaaaaagAGCAAATCCTTCGTTGAAAATTCATATTCCATCCTACAAACGGTTTGGAGCCTTTATGGATCAAACAGGCTATGTGACATTGTTGATCCAATCTTGGATGGAAATTATCCGGAAATGGAAGCATGCAAACTCCTCAAGATAGGGTTGCTTTGTGCACAAGCATCTGCAGAGCTTAGACCACCAATGTCAGTAGTTGTGGAAATGATTAACAACAATCATGGAATTACTCAGCCAACACAACCACCATTTCTTAGTTGTAGTAGTGCAGAATTCAGCAAATTTATTTTACAAGGAGAGAGTTTTCATCCTATATCCTACACTCAGCCTTCAGAGGACAGCGTGACCGAAATTCTGATTCAGCATAAACGGGTTACAATATAA 1947 0.3867 MSFASFFLIFLCYHALPALADPRATEVAVLCTNTTAPMPQRQAFLTNFYDALEALTALVTRQKYAFVVKGTTQNNATVYAFGECRKDLTKPDCDVCFAQCKTRVLRCSPFQRGIDGGMFFFDGCFLRYDGYNFFNESLSPQDFTVCGTEDFSGNWSVYKANTVELVRNLSIEAPKNEGFFVGYVSQRNVTVYGLAQCWKFMNGSACQNCLVEAVTRIDSCASKAEGKALNAGCYLRYSTHNFYNSSNNNVPHENQGHKNLAIIVAVASASLALLLIVATVVFFVRTNLLKRRRERRQFGALLNTVNKSKLNMPYEILEKATDYFSHSNKLGEGGSGSVYKGVLPDGNTMAIKRLSFNTSQWADHFFNEVNLISGIHHKNLVKLLGCSITGPESLLVYEFVPNHSLYDHLSGRKNSQQLTWEVRHKIILGTAEGLAYLHEESQRIIHRDIKLANILVDDNFTPKIADFGLARLFPEDKSHLSTAICGTLGYMAPEYVVLGKLTEKADVYSFGVLIMEIISGKKSKSFVENSYSILQTVWSLYGSNRLCDIVDPILDGNYPEMEACKLLKIGLLCAQASAELRPPMSVVVEMINNNHGITQPTQPPFLSCSSAEFSKFILQGESFHPISYTQPSEDSVTEILIQHKRVTI 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00333 648 Gene3D - 141 242 IPR038408 -
Gma02g00333 648 Gene3D - 24 133 IPR038408 -
Gma02g00333 648 Gene3D Transferase(Phosphotransferase) domain 1 400 601 - -
Gma02g00333 648 CDD STKc_IRAK 330 593 - -
Gma02g00333 648 Gene3D Phosphorylase Kinase; domain 1 284 399 - -
Gma02g00333 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Gma02g00333 648 Pfam Salt stress response/antifungal 150 239 IPR002902 -
Gma02g00333 648 Pfam Salt stress response/antifungal 31 129 IPR002902 -
Gma02g00333 648 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Gma02g00333 648 ProSiteProfiles Gnk2-homologous domain profile. 25 133 IPR002902 -
Gma02g00333 648 ProSiteProfiles Gnk2-homologous domain profile. 139 242 IPR002902 -
Gma02g00333 648 Pfam Protein kinase domain 325 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g00333 648 SMART serkin_6 324 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g00333 648 ProSiteProfiles Protein kinase domain profile. 324 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g00333 648 SUPERFAMILY Protein kinase-like (PK-like) 310 619 IPR011009 -
Gma02g00333 648 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 15 631 - -
Gma02g00333 648 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 15 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00333 Gma-Chr2 3476420 3479694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00333 17 488 Receptor kinase-like Gene Family AT1G70530 58.650 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma02g00333 Pkinase 4.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00333 - - gmx:100802190 1280
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00333 02 3476420 3479694 Gma02g00333 02 3476420 3479694 ECH