Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00315 ATGGCTAATGATACATCGTCAAATGAGTCGTCTTCATCCGATTCCGACAAGGACAAGGCTTCGCCTCCGTCGCCGTCATCTTCGTCGAATGATTCAGAGTCTCCGAAAAGTGCACCATCAAAGTCTCCGCCACCATCGCCGCCTCCTTCTCCGTCACCGCCACCGCCGGAAAAATCTTCTCCTCCGCCAACAGAATCTCTGCCGGCGCCGGAGAATtctccgccgccaactccgtcacaatctccaccgccaactccgtctcaatctccaccACCTTCCCCTTCTCCGCCAACTCCACCATCTCCGCCGCCATCGTCAACTCCCCCGCCTTCAAAAGATTCAGCTCCTCCACCCTCTCCGTCAGAGCCACCACCGTCGCCGCCCCAGTCGTCTCCGCCACCTCCACAAAATTCTCCTCCAGCACCACAATCTCAAGCCCCTCCTCCACATTCTCTTTCGCCTCCAACTGCAATTCAAACTCCACTTTCACCTGGTTCCCATGTTACTCCGCCGCCGGCACCAACCGGTTCAGGGCCAAACCACCCTTCACCACCGCGATCTCCGCCGTCTACCCAACCGAAACCAAGCGGTGCTCTCCCGAAAAACGACCCTCCGTCCACATCACCTAGCTCCGGTAATAATACAGGAGAAACTGTTGGTCTTGCTCTCGCCGGGGTTGTCATGATTGCGTTTCTTGCTCTAGTTATTTTCTTTATATTCAGGAGGAAGCAAAAGCGTGCGGGTGTCTATGCCATGCCACCCCCTAGGAAATCTCATATGAAAGGAGGAGGTGCAGATGTGCATTACTTCGTAGAGGAGCCTGGTTTTGGGAGTGGTGCACAAGGTGCCATTAATCTAAGATGTCCTTCAGAACCGGCTCAGCACATGAACACTGGCCAGTTAGTTTTTACCTACGAAAAGATCGCGGAGATCACAAACGGTTTTGCTAGCGAAAACATAATAGGGGAGGGGGGATTTGGGTATGTTTACAAGGCTTCCATGCCTGATGGTAGAGTGGGGGCACTTAAGATGTTGAAGGCTGGTAGTGGCCAGGGAGAAAGGGAGTTTAGGGCTGAGGTGGACATCATCAGCCGAATCCATCATCGGCATTTGGTGTCATTGATTGGTTATTGCATATCTGAACAGCAAAGAGTGCTTATCTATGAGTTCGTTCCTAATGGGAATCTCAGTCAGCACTTGCATGGAAGTGAACGGCCAATTTTGGATTGGCCAAAGAGGATGAAGATAGCAATTGGCTCTGCAAGGGGCCTGGCATATCTCCATGATGGCTGCAACCCAAAGATTATTCACAGAGATATTAAATCAGCAAACATACTTTTGGACAATGCTTATGAGGCACAGGTTGCAGACTTTGGACTTGCCAGGCTAACCGATGATTCGAATACCCACGTATCGACTAGGGTGATGGGGACCTTTGGGTACATGGCTCCAGAGTATGCAACAAGTGGAAAATTAACAGATAGATCAGATGTTTTCTCTTTTGGAGTTGTCCTTCTTGAGCTTATAACTGGAAGGAAACCTGTTGATCCAATGCAGCCCATAGGAGAGGAGAGTTTGGTTGAGTGGGCTCGTCCACTTCTCCTTCGTGCAGTTGAGACAGGTGACTTTGGTGAACTAGTAGACCCCAGGCTTGAACGGCAATATGCGGACACTGAAATGTTCAGAATGATTGAGACAGCTGCAGCATGTGTTCGTCATTCTGCTCCAAAACGACCTCGTATGGTTCAGGTGGCTAGATCCTTAGATAGTGGTGATCAACAATATGATCTATCTAATGGGGTGAAATATGGTCAGAGCACTATTTATGATTCTGGCCAGTATAATGAAGACATTACGATATTCAAAAGGATGGTTAATGGCAGCTTTGATGATTCTGAGTTTGATATGGACAGCACGACGGATTACCGTTCAACTGTTTCAAGAGAAATGTCTGGATCCAGACATGCAAGGATGTTATATAGTGAAGGTGGTGATTCAGATTATAGAGTTTTCCACGGCCAACGGAGCAATACGCAGAACATGTCTTGA 2049 0.4758 MANDTSSNESSSSDSDKDKASPPSPSSSSNDSESPKSAPSKSPPPSPPPSPSPPPPEKSSPPPTESLPAPENSPPPTPSQSPPPTPSQSPPPSPSPPTPPSPPPSSTPPPSKDSAPPPSPSEPPPSPPQSSPPPPQNSPPAPQSQAPPPHSLSPPTAIQTPLSPGSHVTPPPAPTGSGPNHPSPPRSPPSTQPKPSGALPKNDPPSTSPSSGNNTGETVGLALAGVVMIAFLALVIFFIFRRKQKRAGVYAMPPPRKSHMKGGGADVHYFVEEPGFGSGAQGAINLRCPSEPAQHMNTGQLVFTYEKIAEITNGFASENIIGEGGFGYVYKASMPDGRVGALKMLKAGSGQGEREFRAEVDIISRIHHRHLVSLIGYCISEQQRVLIYEFVPNGNLSQHLHGSERPILDWPKRMKIAIGSARGLAYLHDGCNPKIIHRDIKSANILLDNAYEAQVADFGLARLTDDSNTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDPMQPIGEESLVEWARPLLLRAVETGDFGELVDPRLERQYADTEMFRMIETAAACVRHSAPKRPRMVQVARSLDSGDQQYDLSNGVKYGQSTIYDSGQYNEDITIFKRMVNGSFDDSEFDMDSTTDYRSTVSREMSGSRHARMLYSEGGDSDYRVFHGQRSNTQNMS 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00315 682 CDD STKc_IRAK 321 589 - -
Gma02g00315 682 SMART serkin_6 315 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g00315 682 PANTHER RECEPTOR-LIKE KINASE 66 682 - -
Gma02g00315 682 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 66 682 - -
Gma02g00315 682 Gene3D Phosphorylase Kinase; domain 1 284 390 - -
Gma02g00315 682 Pfam Protein tyrosine and serine/threonine kinase 318 584 IPR001245 GO:0004672|GO:0006468
Gma02g00315 682 MobiDBLite consensus disorder prediction 17 37 - -
Gma02g00315 682 Gene3D Transferase(Phosphotransferase) domain 1 391 607 - -
Gma02g00315 682 MobiDBLite consensus disorder prediction 1 214 - -
Gma02g00315 682 SUPERFAMILY Protein kinase-like (PK-like) 295 588 IPR011009 -
Gma02g00315 682 ProSiteProfiles Protein kinase domain profile. 315 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g00315 682 MobiDBLite consensus disorder prediction 165 202 - -
Gma02g00315 682 MobiDBLite consensus disorder prediction 38 155 - -
Gma02g00315 682 PRINTS Proline rich extensin signature 23 44 - -
Gma02g00315 682 PRINTS Proline rich extensin signature 47 63 - -
Gma02g00315 682 PRINTS Proline rich extensin signature 79 104 - -
Gma02g00315 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00315 Gma-Chr2 3292959 3298104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00315 166 651 Trihelix Transcription Factor Family AT1G70460 56.385 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Gma02g00315 PK_Tyr_Ser-Thr 3.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00315 - - gmx:100807815 949.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00315 02 3292959 3298104 Gma02g00315 02 3292959 3298104 ECH
Gma01g00284 01 3214668 3219334 Gma02g00315 02 3292959 3298104 GST