Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00302 ATGGCTTCTTCATTGAGGATCTCAAGGCTCCTCTCTCGTTCTTTTCTTTCTGCTTCCACTACTACTCCTTTGTTTTCTAGAGGCGGAAGTGGTGCTCTTGGTGCAGGGCTCAGTAAATTCAGCACTGCTGCTGCCATTGAAGAACCAATTAAACCACCAATTAAAGTAGAACACACCCAGCTCTTAATTGATGGAAAATTTGTTGATGCTGCTACTGGCAAAACTTTTCCAACGTTGGACCCCAGGACAGGAGATGTGATTTCTCATGTTGCTGAGGGTGACCATGAAGATGTTGATCGAGCAGTTGCAGCTGCTCGCAAAGCCTTCGACCGCGGACCTTGGCCAAAGATGACAGCCTATGAAAGACAAAGGATATTGCTGCGTGCTGCTGATCTGTTTGAAAAGCACAATGATGACCTTGCTGCACTCGAGACTTGGGATAATGGGAAGCCATATGAACAGTCTGCTCAAATCGAAATTCCAATGCTGGTTCGCCTATTTCGATACTATGCTGGTTGGGCAGATAAGATTCATGGTCTCACAGTTCCAGCTGATGGGCCATATCATGTGCAAACATTGCATGAACCCATTGGTGTTGCCGGTCAGATCATTCCGTGGAACTTCCCTCTTGTCATGTTTGCCTGGAAGGTTGGGCCAGCATTGGCCTGTGGTAACACCATTGTTCTCAAAACAGCTGAGCAGACTCCATTATCTGCTTTGTATGCATCAAAGTTGCTTCATGAGGCTGGACTGCCTCCTGGTGTTCTGAATATAATATCTGGCTTTGGTCCAACTGCCGGTGCTGCTATTGCTAGTCACATGGACATAGATAAGCTTGCTTTCACTGGTTCAACCGAAACTGGAAAAATTGTCCTTGAACTGGCGGCTAGAAGTAACCTTAAGCCTGTAACTTTGGAGCTTGGTGGGAAATCCCCATTCATTGTATGCGAAGATGCTGATGTAGATGAGGCTGTTGAGCTAGCACACTTTGCATTATTCTTTAATCAGGGACAATGCTGCTGTGCCGGGTCTAGAACATTTGTACACGAACGTGTGTACGATGAATTTATTGAGAAAGCAAAGGCACGCGCTTTGAAGCGTGCTGTTGGTGATCCATTCAAGGGGGGAATAGAGCAAGGTCCTCAGATTGATTCAGAACAATTTCAGAAAATACTGAAGTATATTAGATCCGGTGTTGAAAGTGGAGCTACTCTTGAAACCGGAGGAGATAGATTTGGCAACTCGGGCTTCTATATTCAGCCTACTGTCTTCTCAAATGTTAAGGATGACATGCTGATTGCGAAGGAAGAGATCTTTGGCCCAGTGCAAAGCATATTAAAATTCAAGGACCTTGATGATGTGATTCAAAGAGCAAATAACACACACTATGGCCTTGCAGCAGGGGTGTTCACAAAAAACATTAACACAGCTAATACTTTGACTAGAGCATTGAGAGCTGGAACAGTGTGGGTGAACTGCTTTGATACATTTGATGCAGCAATTCCCTTTGGAGGGTACAAAATGAGTGGTCAAGGAAGAGAAAAAGGAGAATACAGTCTCAAGAATTACTTGCAAGTGAAGGCTGTTGTTACATCCTTGAAGAACCCAGCTTGGCTTTGA 1620 0.4475 MASSLRISRLLSRSFLSASTTTPLFSRGGSGALGAGLSKFSTAAAIEEPIKPPIKVEHTQLLIDGKFVDAATGKTFPTLDPRTGDVISHVAEGDHEDVDRAVAAARKAFDRGPWPKMTAYERQRILLRAADLFEKHNDDLAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAEQTPLSALYASKLLHEAGLPPGVLNIISGFGPTAGAAIASHMDIDKLAFTGSTETGKIVLELAARSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFIEKAKARALKRAVGDPFKGGIEQGPQIDSEQFQKILKYIRSGVESGATLETGGDRFGNSGFYIQPTVFSNVKDDMLIAKEEIFGPVQSILKFKDLDDVIQRANNTHYGLAAGVFTKNINTANTLTRALRAGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTSLKNPAWL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00302 539 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 305 312 IPR029510 GO:0016491
Gma02g00302 539 SUPERFAMILY ALDH-like 55 533 IPR016161 GO:0016491
Gma02g00302 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 63 527 IPR016162 GO:0016491
Gma02g00302 539 Pfam Aldehyde dehydrogenase family 68 529 IPR015590 GO:0016491
Gma02g00302 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 309 498 IPR016163 GO:0016620
Gma02g00302 539 CDD ALDH_F2BC 56 531 - -
Gma02g00302 539 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 333 344 IPR016160 GO:0016491
Gma02g00302 539 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 27 539 - -
Gma02g00302 539 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 27 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00302 Gma-Chr2 3178533 3182912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00302 6 539 Aldehyde Dehydrogenase Gene Family AT3G48000 77.196 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00302 K00128 - gmx:100782019 1038.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00302 02 3178533 3182912 Gma02g00302 02 3178533 3182912 ECH
Gma01g00294 01 3327086 3331007 Gma02g00302 02 3178533 3182912 GST
Gma02g00302 02 3178533 3182912 Gma18g01238 18 20095592 20099200 PCT
Gma18g01238 18 20095592 20099200 Gma02g00302 02 3178533 3182912 PCT