Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00288 ATGGTGGGTGTAGGAGTGAGTGTATCCGCAGCAATGGTTGCAACTCTTTTCTTGGAAGTGGGATTGAACACTCTAATCAAAGCAGCAAACACCAATGGAATGAGTAATTTTGTTTTCATTGTCTACTCAAACTTCTTGGCTCTCTTCTTCCTTATACCCTCCACCTTCCTCTACCACAGGAAAAGAGCTCCTCCCCCAATTCCAAGCTCAATTCTCTGGAGAATTTTTCTTCTTAGTTGCCTCAGTACTGCAGTGCAGACGTTGACGTACACTGGGATCGCATATAGCTCTCCCACACTAAACTCCGCTATGTCGGACCTTGTCCCTGCTTTTACCTTCATATTTGCCATTATTTCCAGGATGGAAAATCTGAATCTGAAACTGCGTAGCAGCCATGCAAAAATTATTGGCACAGTGATCTCGATTGCAGGGGCATTGATAATCACTTTATACAAAGGAATGCCATTGACTGGCAGTTCTATGAGAAACTTAGTATTGGGTGGAAGTGAAGCTTACCTCTCAGTGCAATTAGATTGGATAATTGGTGGTTTTCTTCTTGCAACATCTAGCTTGTGCCTTTCAGTTTTGTTTATTGTTCAGACTTGGATTATCAAGGACTATCCTGAAGAGTTAGTGGTAACAACCATTTGTTGCAGCCCGGTGGTAATCCTATCTACCATAGTAGCTCTCTTTGCAGAGGCCAATCCAAGAGCTTGGATACTCAAATCTAATAAAGAGTTGATAGCTGTATTTTATTCAGCAATATTTGTTGTATCAATGCGGAGTGTTGTATACACATGGGCAATGCGAAAGAAGGGACCCGTTTATGTAGCTATGTTTAGCCCTTTGGGAATGGTCATTGCAATTGGAATGGGGGTAATATTTCTGGGAGAGAGTCTGTATCTTGGAAGTATGATTGGAGCTGCTACAATAGGTATTGGATTTTATGCTGTGATGTGGGCTCAGGCTCAAGATGAAAAACTGGTAAATGAGAAGAATGAAAACCATGATTTTGTCACATCTTCTTCAGCTCCTCTTTTGTCTACCTAA 1050 0.4152 MVGVGVSVSAAMVATLFLEVGLNTLIKAANTNGMSNFVFIVYSNFLALFFLIPSTFLYHRKRAPPPIPSSILWRIFLLSCLSTAVQTLTYTGIAYSSPTLNSAMSDLVPAFTFIFAIISRMENLNLKLRSSHAKIIGTVISIAGALIITLYKGMPLTGSSMRNLVLGGSEAYLSVQLDWIIGGFLLATSSLCLSVLFIVQTWIIKDYPEELVVTTICCSPVVILSTIVALFAEANPRAWILKSNKELIAVFYSAIFVVSMRSVVYTWAMRKKGPVYVAMFSPLGMVIAIGMGVIFLGESLYLGSMIGAATIGIGFYAVMWAQAQDEKLVNEKNENHDFVTSSSAPLLST 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00288 349 Pfam EamA-like transporter family 181 319 IPR000620 GO:0016020|GO:0016021
Gma02g00288 349 Pfam EamA-like transporter family 11 149 IPR000620 GO:0016020|GO:0016021
Gma02g00288 349 PANTHER WAT1-RELATED PROTEIN 17 324 - -
Gma02g00288 349 PANTHER WAT1-RELATED PROTEIN 17 324 IPR030184 GO:0016021|GO:0022857
Gma02g00288 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 152 - -
Gma02g00288 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00288 Gma-Chr2 3015117 3018261 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00288 19 349 Nodulin-like Gene Family AT3G28050 44.737 6.15e-86 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00288 - - gmx:100793168 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00288 02 3015117 3018261 Gma02g00288 02 3015117 3018261 ECH
Gma01g00307 01 3600355 3605631 Gma02g00288 02 3015117 3018261 GST