Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00284 ATGCCATTTGGTTTGGTCTCACTCTCGGCCTGGAACAAGCGCCGTAGAAGCAAATCTCAAGATCATACAGATCCCTGGGTTTACAAACCTGCACAGCTTTGGCAACTTGAAGATCAAACACCACGACCTACAAAAAGGCTACATGGATCATCTGTTTACACACTCAAGGAGATGGAGGAGGCAACATGTTCATTCAGTGATGAGAATCTGCTTGGAAAAGGAGGATTTGGCAAAGTCTATCGGGGCACTTTGCGGTCAGGAGAGGTTGTAGCAATCAAGAAAATGGAGTTGCCAGCAATTAAAGCAGCTGAGGGGGAACGCGAGTTTCGAGTCGAAGTTGACATCTTGAGCAGACTTGACCACCCAAATCTTGTTTCTTTGATAGGCTACTGTGCTGATGGAAAGCATAGATTCCTAGTATATGAATATATGCGTAAAGGGAACCTGCAGGATCATTTGAATGGAATTGGGGAAAGAAACATGGATTGGCCTCGAAGACTCCAAGTGGCACTGGGAGCTGCAAAAGGACTTGCTTATCTCCATTCAAGTTCTGATGTTGGAATTCCTATTGTTCATAGGGATTTCAAATCGACCAATATTCTCTTAGACGATAACTTTGAAGCAAAGATATCTGATTTTGGACTCGCGAAGTTAATGCCAGAAGGGCAAGAGACACATGTGACTGCCAGAGTGCTTGGTACCTTTGGCTATTTTGATCCCGAGTATACATCGACTGGGAAACTCACTCTACAGAGTGATGTTTATGCTTTTGGTGTTGTTCTTTTGGAGCTTTTGACTGGACGTCGAGCTGTAGATCTAAACCAAGGTCCCAACGATCAAAACCTTGTACTACAGGTGAGGCACATACTGCATGACCGCAAGAAGCTTCGTAAGGTGATAGATCCAGAGATGGCTCGAAATTCTTACACCATTCAGTCTATAGTCATGTTTGCCAATCTGGCATCAAGATGCGTTCGTACTGAGAGTAATGAAAGACCTTCAATCGTAGAATGTATAAAAGAACTCCTAATGATTATCTATACAAATTCAAAAGGCTTGGGAATGGTTATGCATAGTTTGAGAATGATCTAG 1092 0.4313 MPFGLVSLSAWNKRRRSKSQDHTDPWVYKPAQLWQLEDQTPRPTKRLHGSSVYTLKEMEEATCSFSDENLLGKGGFGKVYRGTLRSGEVVAIKKMELPAIKAAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMRKGNLQDHLNGIGERNMDWPRRLQVALGAAKGLAYLHSSSDVGIPIVHRDFKSTNILLDDNFEAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHILHDRKKLRKVIDPEMARNSYTIQSIVMFANLASRCVRTESNERPSIVECIKELLMIIYTNSKGLGMVMHSLRMI 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00284 363 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 363 - -
Gma02g00284 363 PANTHER OS01G0750732 PROTEIN 1 363 - -
Gma02g00284 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Gma02g00284 363 Gene3D Phosphorylase Kinase; domain 1 34 143 - -
Gma02g00284 363 SUPERFAMILY Protein kinase-like (PK-like) 42 348 IPR011009 -
Gma02g00284 363 ProSiteProfiles Protein kinase domain profile. 65 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g00284 363 CDD STKc_IRAK 71 342 - -
Gma02g00284 363 Pfam Protein kinase domain 66 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g00284 363 PIRSF ILK 34 354 - -
Gma02g00284 363 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Gma02g00284 363 Gene3D Transferase(Phosphotransferase) domain 1 144 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00284 Gma-Chr2 2967709 2971344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00284 48 346 Receptor kinase-like Gene Family AT3G58690 46.053 1.77e-89 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Gma02g00284 Pkinase 9.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00284 - - gmx:100777910 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00284 02 2967709 2971344 Gma02g00284 02 2967709 2971344 ECH