Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00268 ATGTCGGTCTCCTGCTCCAACTGCTTCCCCGACGACGACGACTCCTTCCTTCTCTGCGGCGAGGACTCCTCCGGAATCATCGATTCCTCGCCGGAGTGTTCCTCTGACCTCGATTCTCCCCCGCCTTCGGAGGCGGAGGCGGAATCCATAGCCGGATTCATCGAAGACGAGCGCAACTTCGTCCCCGGATTTGAATACCTCAACAGGTTTCAATCTCGCTCTCTCGACGCTTCTGCCAGAGAAGAATCGGTTGCATGGATTCTCAAGGTGCAGGCTTATTACGCTTTTCAACCACTCACTGCTTATCTTTCCGTCAACTACTTGGATCGGTTCTTGAATTCTCGGCAGTTGCCGCAAACGAATGGGTGGCCACTGCAACTTCTCTCTGTTGCCTGTTTGTCTTTAGCAGCAAAGATGGAGGAACCTCTAGTTCCGTCTCTGTTGGACCTTCAGGTAGAAGGTGCCAAATACGTATTTGAGCCCAAAACAATTAGAAGGATGGAGCTACTTGTTCTGGGCGTGTTGGATTGGAGGCTAAGATCGGTTACCCCATTTAGCTTCCTCGATTTCTTTGCGTGCAAGTTAGATTCATCTGGAACTTTTACCGGGTTCCTCATTTCACGTGCTACACAAATTATCTTGTCTAATATCCAAGAGGCTAGCTTTCTTGCGTATTGGCCATCATGCATTGCTGCAGCGTCCATTCTCCATGCAGCAAATGAGATTCCTAATTGGTCTTTCGTTAGGCCTGAGCATGCAGAGTCATGGTGTGAGGGGCTTAGAAAGGAGAAAGTTATAGGGTGCTACCAATTAATGCAAGAACTTGTGATTAACAATAACCGGAGGAAACCCCCTAAAGTGTTACCACAGCTGCGAGTGACATCTCGGCCCATCATGAGGTCTAGTGTCTCATCATTCTCAGCATCATCATCCTTTTCTCCTTCATCCTCATTGTCTTGTAAAAGGAGGAAATTAAATAACTCTTTGTGGGTAGATGATGACAAAGGAAACTCCAAATGA 1020 0.4784 MSVSCSNCFPDDDDSFLLCGEDSSGIIDSSPECSSDLDSPPPSEAEAESIAGFIEDERNFVPGFEYLNRFQSRSLDASAREESVAWILKVQAYYAFQPLTAYLSVNYLDRFLNSRQLPQTNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYVFEPKTIRRMELLVLGVLDWRLRSVTPFSFLDFFACKLDSSGTFTGFLISRATQIILSNIQEASFLAYWPSCIAAASILHAANEIPNWSFVRPEHAESWCEGLRKEKVIGCYQLMQELVINNNRRKPPKVLPQLRVTSRPIMRSSVSSFSASSSFSPSSSLSCKRRKLNNSLWVDDDKGNSK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00268 339 CDD CYCLIN 86 172 IPR013763 -
Gma02g00268 339 Gene3D - 54 243 - -
Gma02g00268 339 SUPERFAMILY Cyclin-like 45 179 IPR036915 -
Gma02g00268 339 SUPERFAMILY Cyclin-like 164 283 IPR036915 -
Gma02g00268 339 Pfam Cyclin, N-terminal domain 52 179 IPR006671 -
Gma02g00268 339 PANTHER CYCLINS 1 329 IPR039361 -
Gma02g00268 339 SMART cyclin_7 85 173 IPR013763 -
Gma02g00268 339 Gene3D - 63 180 - -
Gma02g00268 339 ProSitePatterns Cyclins signature. 80 111 IPR006671 -
Gma02g00268 339 SMART Cyclin_C_2 182 315 IPR004367 -
Gma02g00268 339 Pfam Cyclin, C-terminal domain 182 292 IPR004367 -
Gma02g00268 339 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00268 Gma-Chr2 2823446 2826593 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00268 1 338 Core Cell Cycle Gene Families AT1G70210 62.353 1.11e-137 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00268 K18810 - gmx:100775224 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00495 01 6916890 6922559 Gma02g00268 02 2823446 2826593 GST
Gma02g00268 02 2823446 2826593 Gma18g01204 18 18852831 18858190 PCT
Gma18g01204 18 18852831 18858190 Gma02g00268 02 2823446 2826593 PCT