Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00259 ATGGAAAAGGATATCATTGATCTTTCTCCAACATGGGATTGTGACAATGGCAATTCCACTGAGAAAAGGCTCAGGCTATTTGGCTTTGAGCTAAACCCTTCATCAAAAGAGGGTTGTGCCAAAGAATCTGGTGAAGGAGATGAAAGTGTGAACTCCTCTAACTCAGCTTCTTCTGGAGGAGACAAAACTGTGCAAGAGAAAACATCAGCCAATGACCCTGATGAGAGAAAATTTGAGTGCCAATATTGTTACAAGGAATTTGCAAACTCCCAAGCCCTAGGGGGGCACCAAAATGCTCACAAGAAAGAGAGAATGAAGAAGAAGAGGTTGCAGCTTCAATCCATAAACCGTTACCTACAACACCCTTTCCAAAGCAACCATGGCTTTGCTTACCCTTCTGATACTCCTTGGTTCTATGACCCCTCTACCTATAATAATAACTCTGAGTTCACCCTTTGTGAAGAACCTCAGATTAGCTTCAATTCAAATAGCGTTTTGGATTCCAATTTTTCTAATGATCAGAAAACTAGTTGGTATTCTCTTGCATCTCACCCTTCTAATATCCAACAAGATACTTGCATGTTTACTTTCTCATCCAATGCAAGTAATAATAATAATAGTCCTTTCATATTCAAGCCTTGCCATTTCCCTGCTTCAAATCAGAACCATAATAAAACCCTAGATCTTCAACTAGGTCTCAACTTGGAGTCAAATACAAGAAGTTCTCTAAGAAGGATGTAA 741 0.3954 MEKDIIDLSPTWDCDNGNSTEKRLRLFGFELNPSSKEGCAKESGEGDESVNSSNSASSGGDKTVQEKTSANDPDERKFECQYCYKEFANSQALGGHQNAHKKERMKKKRLQLQSINRYLQHPFQSNHGFAYPSDTPWFYDPSTYNNNSEFTLCEEPQISFNSNSVLDSNFSNDQKTSWYSLASHPSNIQQDTCMFTFSSNASNNNNSPFIFKPCHFPASNQNHNKTLDLQLGLNLESNTRSSLRRM 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00259 246 ProSitePatterns Zinc finger C2H2 type domain signature. 80 100 IPR013087 -
Gma02g00259 246 MobiDBLite consensus disorder prediction 33 73 - -
Gma02g00259 246 Pfam C2H2-type zinc finger 78 103 - -
Gma02g00259 246 ProSiteProfiles Zinc finger C2H2 type domain profile. 78 105 IPR013087 -
Gma02g00259 246 Gene3D Classic Zinc Finger 51 127 - -
Gma02g00259 246 MobiDBLite consensus disorder prediction 46 66 - -
Gma02g00259 246 PANTHER ZINC FINGER PROTEIN 5 18 235 - -
Gma02g00259 246 PANTHER ZINC FINGER PROTEIN 5 18 235 IPR044299 GO:0010090
Gma02g00259 246 SUPERFAMILY beta-beta-alpha zinc fingers 74 105 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00259 Gma-Chr2 2723615 2724707 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00259 75 143 C2H2 Transcription Factor Family AT1G68360 43.478 2.84e-16 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma02g00259 zf-C2H2_6 6.7e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00259 - - gmx:100799857 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00259 02 2723615 2724707 Gma02g00259 02 2723615 2724707 ECH
Gma01g00334 01 3925464 3926687 Gma02g00259 02 2723615 2724707 GST