Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00249 ATGGACACGGACAGCTTCGTTTCCTTCGATCATGTTTCGCCGGAGGATTCCCACGAGGTTCATGTCTTGGCCGTTGATGACAGCCTCGTCGATCGAAAGGTCATTGAACGCTTGCTTAAAATCTCAGCTTGTAAAGTTACTGCTGTGGATAGTGGAATCAGAGCACTGCAGTTTCTGGGGCTGGACGAGCAGAGAAGGACCTCTGAATCTGATGGTTTTGTCCCGGATTTGAAGGTGGATCTAATTATCACTGACTACTGCATGCCCGAAATGACCGGTTACGAGTTGCTCAAGAAAATCAAGGAATCGACCATGTTCAGAGAAATTCCAGTAGTGATCATGTCTTCCGAAAACATTTTGCCGCGCATAGACAGATGTTTGGAAGAAGGTGCAGAGGATTTCATAGTAAAGCCAGTGAAATTATCTGATGTAAAACGGTTAAAGGGTTACATGACACCCAAAGAGGTTATTAAGATGAGAAGCCAAGAAGACAGAAGAAGTGATGGCTATGTTAACGGTGGTGATGGTGGTGTTCTGGAGATAAACAACAAAAGAAAGCTGGAAGAGCAAGACACCTCTGACGTGTCATTATCACCACCGTCAACTTCTACCCTTTCATCATCACCGTCCGTTTCCTCACCATCACCGTCATCTTCTCCTACTTCTTCAGCCAGCGTGCTTGCCTCTCCAATCAGACGGCTTAAAATGACCAGCACCGATTGA 723 0.4592 MDTDSFVSFDHVSPEDSHEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQRRTSESDGFVPDLKVDLIITDYCMPEMTGYELLKKIKESTMFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKGYMTPKEVIKMRSQEDRRSDGYVNGGDGGVLEINNKRKLEEQDTSDVSLSPPSTSTLSSSPSVSSPSPSSSPTSSASVLASPIRRLKMTSTD 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00249 240 MobiDBLite consensus disorder prediction 193 240 - -
Gma02g00249 240 ProSiteProfiles Response regulatory domain profile. 21 152 IPR001789 GO:0000160
Gma02g00249 240 SUPERFAMILY CheY-like 20 146 IPR011006 -
Gma02g00249 240 CDD REC_typeA_ARR 22 147 - -
Gma02g00249 240 Gene3D - 20 198 - -
Gma02g00249 240 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 10 239 - -
Gma02g00249 240 MobiDBLite consensus disorder prediction 159 240 - -
Gma02g00249 240 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 239 IPR045279 GO:0009736
Gma02g00249 240 SMART REC_2 20 151 IPR001789 GO:0000160
Gma02g00249 240 Pfam Response regulator receiver domain 22 144 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00249 Gma-Chr2 2505338 2506889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00249 14 232 Response Regulator Gene Family AT1G59940 56.579 9.74e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma02g00249 Response_reg 1.7e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00249 K14492 - gmx:100787696 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00249 02 2505338 2506889 Gma02g00249 02 2505338 2506889 ECH
Gma01g00340 01 4052404 4053588 Gma02g00249 02 2505338 2506889 GST
Gma02g00249 02 2505338 2506889 Gma18g01184 18 18221286 18222709 PCT
Gma18g01184 18 18221286 18222709 Gma02g00249 02 2505338 2506889 PCT