LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma02g00248	ATGTATTTGAACATGATGCTTCTTCTTCTTGTGATCCTTTTTGTTTTACAAGGTTTTCCAATACCAACATGCTATTGCCAGACCAATACTCCTCAGAACATTGAAACATTTTATCCAATTCAAACACCCAAACCACCCCTCCTAATCCAACCTCCTGAGGCACAACCAAAGCCACAAGCATCACCACCATCACCAAGACCAGTGGCTGCATCAAAAACCTCTTCATCAAGCAGTAAGATCGGAACAGCGGTGGCTGCAACAGCAGCAGGTACTCTAGTTGTTTCTGGTTTGATTTTCTTCTTGGTTCAAAGGTGCTTCAGAGCAAGGAAGAGAAAGGAGGCCAAAAACAACACTGCTTCCGCTGTGGATAGGCGCGTTGTGCCTCAGGTAGACGTGTTCAAGAGAATGGAAGGGAACGTCAAGGGACTAATTGTTGATGATGATGGTTTGGATGTGGTTTACTGGAGAAAACTCGAAGGTAAGAAATTACCTGACAAGGATTTCCAAAGGGAGGTTTTGGATAGCACCGAAGACAAAATAGAAGATGATCATGAGGGGAACAATGGGAAAAGATCTGAGTCCATTCAAGAAACTCTTCTGCTTAGAGACAGATCTTCAGCATCTCACATGAATATATTTCTTCCAGAACAGTCATATACAATCATGAGAATTCCACCTCCTGCTCCTCCTCCCAGTGTTCCTTCATCAATTGGAGGCTCTTCTACTCAACTATCTTCTCCACCCTTTACCCCTTCATCACCAAAACCACTCAACACTTTTTTCTCATCAATTCCAAACACGTCAAGTCCTGCACCACCAATTCCGCCTCCAACAATACCTGATAGAAATAATCAAGCACCAGCACCACCTcctcctccaccaccaatcccgggtataaaaagctcagcactgcctctgcctcctcctccaccaatcccagttaaaaagagctcaacgcctccaccacctcctccaccaatTCCTCCTAGAAAGAGTCCAGCACCACCTCCTCCTCCACCAAAGGCACATGGTTTGAAGTCATCATCAAAACCACCACCTACCCCTATTGAAAGAACACCAAGTACCACAAGTAAAGAAGGCAACACTTCACCTGAGGTAAAACTGAAGCCATTACATTGGGATAAGGTGACTACCAACCTTGATCACTCTATGGTATGGGACAAAATGGACCGAGGTTCTTTCAGGGTTGATGATGATCTTATGGAAGCTCTTTTCGGGTTAGTGGCTGCCAACCGAAATGACAGTACCCCAAAAGTAAATAATTCAATGAGTCCTAGCAGGGATGCTTTGGCTCCATCAGTGAATACCTTCATTCTTGACCCCAGAAAATCACAAAACATTGCTATTGTTTTGAAGTCTCTGGCGGTCTCGCGCAAAGAAATTATTGAAGCACTCATTGATGGTCAAGGCCTTAATGCAGACACCATCGAAAAGCTTGGTAGAGTAGCCCCAACAGAAGAAGAGCAAACACTTATAGTTGCATATGAAGGAAACCCTTCAAAACTTGCTGCAGCTGAATCTTTCCTACATCACATCCTCAGAGCAGTTCCTTCGGCATTTAAGCGCTTGAATGCTTTGTTATTCAGGTTGAATTATGATTCTGAGATTGTAGAAATCAAGGAGTTTCTGCAGACACTTGCACTGGGGTGCAAGGAGCTTCGAAACCAAGGAATGTTTGTGAAGCTTCTTGAAGCAGTGCTTAAGGCCGGAAATCGCATGAATGCAGGCACTCAAAGGGGCAATGCTCAAGCTTTCAACTTGGTTTCTCTCAGAAAGCTCTCTGATGTCAAGAGTACTGATGGAAAAACCACATTGCTTCGCTTTGTGGTTGAAGAAGTAGTTCGTGCGGAAGGAAAACGCGCTGTTCTTAACCGCAATCACAGTTTGAGCCGTAGTAGCAGTAGGAACAGCAACAGCAGTGTGGACTCTCAAAACTCTGCTGTTTCAAATGAACAAAGGCAAAGGGAATACATAACACTAGGATTGCCAGTTGTAGGAGGGATCAGTTCCGAGTTTTCCAACTTAAGGAAAGCTGCGGTTACAGATTACAAAAGTTTTGTTGGTTCAATCTCATCACTCTCAGCTAGGATTGTTGAGATTAGAGAACTTGTTTCCCAGTGTGGAAATGACAAAGGAGGCAACTTTGTGAGAGAAATGAACAATTTTCTTGAAAATGCTGAGGAGGAACTTAGATTAGTGAGGGAGGAGCAAACAAGGGTAATGCAGCTTGTCAAAAGAACAACAGATTATTATCAAGGAGGATCTTCAAAAGAGAGTGCAGAAAACCCTCTTTATCTATTTGTCATAGTTAAGGATTTTCTGGGAATGGTTGATCAAGCATGCATTGAGATTGCTCGTAACATGCAGAAGAGAAAGACAAAGACATCTTTGTAA	2415	0.4104	MYLNMMLLLLVILFVLQGFPIPTCYCQTNTPQNIETFYPIQTPKPPLLIQPPEAQPKPQASPPSPRPVAASKTSSSSSKIGTAVAATAAGTLVVSGLIFFLVQRCFRARKRKEAKNNTASAVDRRVVPQVDVFKRMEGNVKGLIVDDDGLDVVYWRKLEGKKLPDKDFQREVLDSTEDKIEDDHEGNNGKRSESIQETLLLRDRSSASHMNIFLPEQSYTIMRIPPPAPPPSVPSSIGGSSTQLSSPPFTPSSPKPLNTFFSSIPNTSSPAPPIPPPTIPDRNNQAPAPPPPPPPIPGIKSSALPLPPPPPIPVKKSSTPPPPPPPIPPRKSPAPPPPPPKAHGLKSSSKPPPTPIERTPSTTSKEGNTSPEVKLKPLHWDKVTTNLDHSMVWDKMDRGSFRVDDDLMEALFGLVAANRNDSTPKVNNSMSPSRDALAPSVNTFILDPRKSQNIAIVLKSLAVSRKEIIEALIDGQGLNADTIEKLGRVAPTEEEQTLIVAYEGNPSKLAAAESFLHHILRAVPSAFKRLNALLFRLNYDSEIVEIKEFLQTLALGCKELRNQGMFVKLLEAVLKAGNRMNAGTQRGNAQAFNLVSLRKLSDVKSTDGKTTLLRFVVEEVVRAEGKRAVLNRNHSLSRSSSRNSNSSVDSQNSAVSNEQRQREYITLGLPVVGGISSEFSNLRKAAVTDYKSFVGSISSLSARIVEIRELVSQCGNDKGGNFVREMNNFLENAEEELRLVREEQTRVMQLVKRTTDYYQGGSSKESAENPLYLFVIVKDFLGMVDQACIEIARNMQKRKTKTSL	804

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma02g00248	804	SMART	it6_source	365	799	IPR015425	-
	Gma02g00248	804	MobiDBLite	consensus disorder prediction	48	74	-	-
	Gma02g00248	804	Coils	Coil	723	750	-	-
	Gma02g00248	804	MobiDBLite	consensus disorder prediction	175	191	-	-
	Gma02g00248	804	MobiDBLite	consensus disorder prediction	175	196	-	-
	Gma02g00248	804	MobiDBLite	consensus disorder prediction	223	377	-	-
	Gma02g00248	804	PANTHER	FORMIN-LIKE PROTEIN 4	305	802	-	-
	Gma02g00248	804	PANTHER	FORMIN-LIKE PROTEIN 4	5	317	-	-
	Gma02g00248	804	PANTHER	FORMIN-RELATED	305	802	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Gma02g00248	804	PANTHER	FORMIN-RELATED	5	317	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Gma02g00248	804	MobiDBLite	consensus disorder prediction	48	65	-	-
	Gma02g00248	804	MobiDBLite	consensus disorder prediction	268	346	-	-
	Gma02g00248	804	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	444	800	-	-
	Gma02g00248	804	Gene3D	Formin, FH2 domain	387	803	IPR042201	-
	Gma02g00248	804	Pfam	Formin Homology 2 Domain	369	784	IPR015425	-
	Gma02g00248	804	MobiDBLite	consensus disorder prediction	632	659	-	-
	Gma02g00248	804	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	365	804	IPR015425	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma02g00248	Gma-Chr2	2491904	2494402	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma02g00248	8	799	FH2 protein (formin) Gene Family	AT1G70140	43.564	0.0	585

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma02g00248	-		-	gmx:100778804	1301.58

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma02g00248	02	2491904	2494402	Gma02g00248	02	2491904	2494402	ECH
	Gma01g00341	01	4067508	4070617	Gma02g00248	02	2491904	2494402	GST
	Gma02g00248	02	2491904	2494402	Gma18g01182	18	18184744	18187170	PCT
	Gma18g01182	18	18184744	18187170	Gma02g00248	02	2491904	2494402	PCT