Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00238 ATGATTAATTGCGATGGAGTTTTTGGATTGTTGATCGAAGGTGTTCCTTGGACGGAGGAAGAGCATAGGTTGTTCCTGTTAGGGTTACACAAAGTCGGAAAAGGAGATTGGAGAGGAATTTCTCGAAACTTCGTGAAAACTCGCACGCCTACTCAGGTCGCTAGTCACGCTCAGAAGTACTTCCTCCGCCGCCACAACCAGAACCGCCGTCGCCGGAGATCTAGCCTCTTCGACATCACCACGGATACGGTGATGGAATCTTCTACTATAATGGAAGAAGAACAAGTTCCGCAAGAAACGATGGCGGCGCCTATCCCCGCCGCATATCCGCCTTTTCCCGGCGCGGGTTTTCCGATGAGTCTATCTCCGGTGGTGTTGCCGGTGAGTGGTGAGAGACTGACCAAGCCGATCAGGCCGACGCCGATTGTACCGGTGCCTCCGTCTTCGAAGATGGCTAATTTGAACTTGAAAGGGAAAGCTTCTCGGACAAATCTCATTGAGCCTTTGCCGTTGTCGTTGAATCTGCCATCGCCAACGCCGCGGTCTCAGGATCAGTCGCCGGCGAATAGTGGCCACTCGTCGCCGTCATCGTCTTCGGCGGCGGCTTTTCAGGCTATGTCTGCAGCGAAGTTCGGCGGCGGGGGGGATAGTATCATCAGCGTTGCTTGA 669 0.5396 MINCDGVFGLLIEGVPWTEEEHRLFLLGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTDTVMESSTIMEEEQVPQETMAAPIPAAYPPFPGAGFPMSLSPVVLPVSGERLTKPIRPTPIVPVPPSSKMANLNLKGKASRTNLIEPLPLSLNLPSPTPRSQDQSPANSGHSSPSSSSAAAFQAMSAAKFGGGGDSIISVA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00238 222 MobiDBLite consensus disorder prediction 167 202 - -
Gma02g00238 222 MobiDBLite consensus disorder prediction 176 202 - -
Gma02g00238 222 CDD SANT 16 61 IPR001005 -
Gma02g00238 222 Gene3D - 15 66 - -
Gma02g00238 222 SUPERFAMILY Homeodomain-like 15 64 IPR009057 -
Gma02g00238 222 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 65 IPR017930 -
Gma02g00238 222 ProSiteProfiles Myb-like domain profile. 16 61 IPR001005 -
Gma02g00238 222 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE 13 219 - -
Gma02g00238 222 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 14 63 IPR006447 GO:0003677
Gma02g00238 222 Pfam Myb-like DNA-binding domain 16 61 IPR001005 -
Gma02g00238 222 PANTHER TRANSCRIPTION FACTOR KUA1 13 219 - -
Gma02g00238 222 ProSiteProfiles SANT domain profile. 12 65 IPR017884 -
Gma02g00238 222 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00238 Gma-Chr2 2388525 2390918 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma02g00238 Myb_DNA-binding 2.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00238 - - gmx:778178 332.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00350 01 4196298 4199133 Gma02g00238 02 2388525 2390918 GST
Gma02g00238 02 2388525 2390918 Gma18g01172 18 17722571 17725065 PCT
Gma18g01172 18 17722571 17725065 Gma02g00238 02 2388525 2390918 PCT