Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00236 ATGCCGTCTCACGCGGATCTGGACCGGCAGATCGAGCATCTGATGGAGTGCAAGCCTCTGCCGGAGGCCGAGGTGAAGGCGCTGTGCGATCAGGCGAGGGCGATTCTCGTCGAAGAGTGGAACGTTCAGCCGGTGAAGTGCCCCGTCACCGTCTGCGGCGACATTCACGGCCAGTTCTACGATCTCATCGAGCTCTTTCGGATAGGAGGAAACGCTCCCGATACTAATTACCTGTTTATGGGCGATTATGTAGATCGTGGGTACTATTCAGTGGAGACTGTTACGCTTTTGGTGGCCTTGAAAGTTCGTTACAGAGATAGAATTACAATCCTTAGGGGAAATCACGAGAGCCGTCAAATCACTCAAGTGTATGGCTTCTATGACGAATGCTTGAGAAAGTATGGAAATGCCAATGTCTGGAAATTCTTCACCGACTTGTTTGATTATTTACCTCTGACTGCCCTTATTGAGAGTCAGATTTTCTGTTTGCATGGAGGTCTCTCACCATCTTTGGATACACTTGATAATATCCGTGCCTTGGATCGCATACAGGAGGTTCCACACGAAGGACCAATGTGTGACCTCTTGTGGTCTGATCCAGATGATCGCTGTGGTTGGGGAATATCTCCACGTGGTGCTGGATATACATTTGGACAGGATATAGCTGCTCAGTTCAATCATACCAATGGTCTATCGCTGATATCTAGAGCTCACCAACTTGTAATGGAAGGATTCAATTGGTGCCAGGACAAGAATGTGGTGACTGTTTTTAGTGCACCTAATTACTGTTACCGATGTGGGAACATGGCTGCCATACTGGAAATTGGAGAGAACATGGATCAGAATTTTCTGCAGTTTGATCCAGCTCCCAGACAAATTGAGCCCGACACTACACGAAAGACGCCAGATTATTTTTTGTAA 921 0.4745 MPSHADLDRQIEHLMECKPLPEAEVKALCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKFFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIAAQFNHTNGLSLISRAHQLVMEGFNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00236 306 SMART pp2a_7 20 290 IPR006186 GO:0016787
Gma02g00236 306 Gene3D - 2 306 IPR029052 -
Gma02g00236 306 ProSitePatterns Serine/threonine specific protein phosphatases signature. 111 116 IPR006186 GO:0016787
Gma02g00236 306 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 306 - -
Gma02g00236 306 CDD MPP_PP2A_PP4_PP6 6 290 - -
Gma02g00236 306 PRINTS Serine/threonine phosphatase family signature 48 75 IPR006186 GO:0016787
Gma02g00236 306 PRINTS Serine/threonine phosphatase family signature 77 104 IPR006186 GO:0016787
Gma02g00236 306 PRINTS Serine/threonine phosphatase family signature 110 134 IPR006186 GO:0016787
Gma02g00236 306 PRINTS Serine/threonine phosphatase family signature 145 171 IPR006186 GO:0016787
Gma02g00236 306 PRINTS Serine/threonine phosphatase family signature 174 201 IPR006186 GO:0016787
Gma02g00236 306 PRINTS Serine/threonine phosphatase family signature 230 250 IPR006186 GO:0016787
Gma02g00236 306 PRINTS Serine/threonine phosphatase family signature 252 268 IPR006186 GO:0016787
Gma02g00236 306 Pfam Calcineurin-like phosphoesterase 48 239 IPR004843 GO:0016787
Gma02g00236 306 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 1 306 - -
Gma02g00236 306 SUPERFAMILY Metallo-dependent phosphatases 6 293 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00236 Gma-Chr2 2360553 2364539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00236 49 225 Calmodulin-binding Proteins AT5G63870 36.449 2.75e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00236 K04382 - gmx:100794029 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00236 02 2360553 2364539 Gma02g00236 02 2360553 2364539 ECH
Gma01g00352 01 4229487 4233760 Gma02g00236 02 2360553 2364539 GST
Gma02g00236 02 2360553 2364539 Gma18g01170 18 17661337 17669666 PCT
Gma18g01170 18 17661337 17669666 Gma02g00236 02 2360553 2364539 PCT