Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00233 ATGGAAGCGAATCCCACCCACCATGGGAATGACACCTCGGAGGCGCCAGCGCCGCCCATGGTGGACCCGTCCCCATCTCCGCCGCCTCAAATGAAAGAAGAGGAGATGGACGCGGAGAAAGGCGGTGACACATCTCTTCCGATGAGCGttgttccggcgcatttgacggtgtccaaagcggcggcgaagaggccgtcgaaggatcggcacacgaaggtggagggtcgtggccggagaatcaggatgccggcgacatgtgcggcgaggatcttctag 276 0.3297 MEANPTHHGNDTSEAPAPPMVDPSPSPPPQMKEEEMDAEKGGDTSLPMSVVPAHLTVSKAAAKRPSKDRHTKVEGRGRRIRMPATCAARIF 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00233 91 Pfam TCP family transcription factor 66 91 IPR017887 -
Gma02g00233 91 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 91 IPR005333 GO:0003700
Gma02g00233 91 MobiDBLite consensus disorder prediction 1 91 - -
Gma02g00233 91 MobiDBLite consensus disorder prediction 61 79 - -
Gma02g00233 91 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 15 91 - -
Gma02g00233 91 ProSiteProfiles TCP domain profile. 66 91 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00233 Gma-Chr2 2330214 2330489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00233 55 91 TCP Transcription Factor Family AT1G72010 75.676 2.81e-15 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma02g00233 TCP 4.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00233 - - gmx:100819475 147.902