Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00225 ATGTCTCCATCCATCTTCACCATCATTCTCCTCTCCTTCCTCCTCTTCTCCACACCTTCCAAGTCTCAAACACCATCATGCTCTTCCAATTTAAACACAAGCACACACACCTGCCCTCCATTTCCTTCTAATAATCCCCCTTACCCATTCTCATCTACTCCAGGCTGTGGCCACCCTTCCTTCCACCTAACTTGCTCCACCCCTCACTCCCAAATCTCCATCAACAACTTCTCTTTCTCCATCCTCTCCTATAACCCCAACACCTCCTCCATCACTCTCTCCCCTCACCAACAACACCCCAACAACATTTTCCCTTCCATCCCCACTCACCCCATCAACCTCTCTTCCACCCCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCCCACTCCCCCTTCCAATGCCACCTCCTCAAAAACCCCTCCCACCTCCTCCACGACTGCGCTTCCACCCACCACCACTCCTCCTCCGACACCGACCAGTCCTCCGCCTGCCAGACCGACATCCTCGGCTTCCTCGAAGAGCTCCTCCAGACCGGAATCCAGCTCGACTGGGACGAAACTCGTGATCCTTATTTCACCAACTGCTCCTCCTGCCGTTCAACCAACAACGGCATCTGCGGCTTCAATTTTTCCTCCCCAAACTACCCTTTCCAGTGCTTCCATTTCCACCCCGAATCCACACTCTCCCCTCCCTGGTTCCGCAAATTTAAACCCAGCAAAATCGCCATCTTCACCACCATCATCACCTTAACCTCCCTAATCCTTATAATTTCAGTCACCACCGCCATGCTCCGCAGATCAAAAGCTTCATCAGCAACACAACAAGACCCTAATACCCTCTTCCTCCACAACCACCGCTCCGCAAGCCTCCTCCCTCCCGCTTTCACCTACGAAGATTTAGCTCTTTCAACCAACAACTTCGATTCAAAACGGATAATCGGCGACGGCGGGTTCGGCTCCGTCTACCTAGCAAACCTCCGCGACGGGCGGCTCGCCGCGGTGAAGTACCTCCACCGCCACCACGCCGTTTCCGCCGCGTTCTCCACCAAATCCTTCTGCAACGAGATTCTCATCCTCTCTTCCATCAACCACCCGAACCTCGTGAAGCTTCACGGATACTGTAGCGACCCGAGGGGGCTTCTTTTAGTCTACGATTACATCCCTAACGGAACCCTAGCGGAACACCTGCATAACCGTAAGGGCTCGCTGACGTGGCAGGTGAGGCTCGACATCGCGTTGCAAACGGCGTTAGCGATGGAGTATCTTCACTTCTCGGTGGTGCCGCCGATTGTGCACAGGGACATAACGTCGTCGAATATTTTCGTGGAGAGGGATATGAGGATTAAGGTTGGGGATTTTGGACTTTCGAGGCTTTTGGTGGTGCAGGATAATAACACCACGTCGTCTTCGAACGGGTTTGTGTGGACCGGGCCGCAAGGGACGCCGGGCTATTTGGACCCAGATTATCACCGGTCCTTCCGGTTAACCGAGAAGAGTGACGTGTACAGTTTTGGAGTGGTGTTGCTGGAGCTTATTTCGGGGCTGAGAGCGGTTGATCAGAATAGGGACAAGCGCGAAATGGCGCTTGCGGATTTGGTTGTTTCGCGGATCCAGATGGGGCAGTTACATCAAGTGCTCGACCCGGTTCTTGACTGCGCCGACGGCGGCGTTGCCGCCGTCGCGGAGCTTGCTTTCCGGTGTGTCGCGGCCGATAAGGACGACAGGCCGGACGCCAGGGAGGTGGTGGAGGAGCTGAAGCGGGTGCGCAACAGAGCCGTTACGGCGGCGAAGGAGTGA 2073 0.4713 MSPSIFTIILLSFLLFSTPSKSQTPSCSSNLNTSTHTCPPFPSNNPPYPFSSTPGCGHPSFHLTCSTPHSQISINNFSFSILSYNPNTSSITLSPHQQHPNNIFPSIPTHPINLSSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHSPFQCHLLKNPSHLLHDCASTHHHSSSDTDQSSACQTDILGFLEELLQTGIQLDWDETRDPYFTNCSSCRSTNNGICGFNFSSPNYPFQCFHFHPESTLSPPWFRKFKPSKIAIFTTIITLTSLILIISVTTAMLRRSKASSATQQDPNTLFLHNHRSASLLPPAFTYEDLALSTNNFDSKRIIGDGGFGSVYLANLRDGRLAAVKYLHRHHAVSAAFSTKSFCNEILILSSINHPNLVKLHGYCSDPRGLLLVYDYIPNGTLAEHLHNRKGSLTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVERDMRIKVGDFGLSRLLVVQDNNTTSSSNGFVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLRAVDQNRDKREMALADLVVSRIQMGQLHQVLDPVLDCADGGVAAVAELAFRCVAADKDDRPDAREVVEELKRVRNRAVTAAKE 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00225 690 Gene3D Transferase(Phosphotransferase) domain 1 479 690 - -
Gma02g00225 690 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 226 685 IPR045274 GO:0007166
Gma02g00225 690 SUPERFAMILY Protein kinase-like (PK-like) 380 677 IPR011009 -
Gma02g00225 690 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.5 226 685 - -
Gma02g00225 690 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 27 118 IPR045274 GO:0007166
Gma02g00225 690 ProSitePatterns Tyrosine protein kinases specific active-site signature. 522 534 IPR008266 GO:0004672|GO:0006468
Gma02g00225 690 Pfam Protein tyrosine and serine/threonine kinase 402 677 IPR001245 GO:0004672|GO:0006468
Gma02g00225 690 ProSiteProfiles Protein kinase domain profile. 399 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g00225 690 ProSitePatterns Protein kinases ATP-binding region signature. 405 427 IPR017441 GO:0005524
Gma02g00225 690 Gene3D Phosphorylase Kinase; domain 1 375 478 - -
Gma02g00225 690 CDD STKc_IRAK 405 679 - -
Gma02g00225 690 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.5 27 118 - -
Gma02g00225 690 Coils Coil 670 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00225 Gma-Chr2 2204292 2206707 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00225 6 84 Receptor kinase-like Gene Family AT1G69910 45.570 2.06e-12 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gma02g00225 PK_Tyr_Ser-Thr 8.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00225 - - gmx:100816739 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00225 02 2204292 2206707 Gma02g00225 02 2204292 2206707 ECH