Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00208 ATGCCGATGGAGCTGGAGCAGGAGCTAGGTTCAACAACAATCCAGCGTTCCTTCGACGCGCGCTACACCCGCCACGCGCGCGACTCGCTCGGCGAATTGCCTGACAGCTTCACCATCACCGACCCCTCCATCCCCGGCCACCCCATCGTCTTCGCCAGCCCGGGCTTCCTCAAGCTCACGGGCTACTCCCTCCGCGAAGTCCTGGGCCGGCCCGCAGCCATCTTCCAGGGCCCACGAACATCCCGAAAATCCGTAATCGAAATTCGCGAGGCCGTTAGAGAGGAGCGAAACGCGCAGGTCGTTTTACTCAACTACCGCAGAGACGGTACGCCGTTTTGGATGCTTTTTCGTGTTTCCCCTGTTTTCAGCAGCGACGGTGGCGCCGTCGTGCACTTTGTTGCCGTACAGGTACCGCTTCAGAAAAAAGAAGGGTCCGGAGTGAGGGATTTCGGGTTCGGGTGCTGTCGGAAGGAAGTGTGCGTGGATTCGTTGGCGGAGATTGATCGCGTTTGTTCATTGGAGCAAGTGCTCGAACCTGATGTCAGAGAAGTGGAGAGAGAAGAGCCGTGTGAGGCGAGTGATGATGAGAAGCGAAGTGCTGTTACTGCCATGGACAGTATATTTTCTGTGCTAACCCATTACAGTGAGGCCACAGGGAGATTGGTGTGTAGAAAGAGGTCCAGCATTCCTGACGTGGGTCTTTTAAGCACATCCTTGATTATTTCTCTTGGTAGAATCAAACAAAGCTTTGTATTAACTAATCCGCATTTACCAGACATGCCTATTGTTTATGCTAGTGACGCCTTCTTGAAATTGACAGGTTATGCAAAAAATGAAGTTTTGGGCCACAACTGTAGATTTTTAGGTGGAACAGATACCGATACCTCGACTTTACATCTGGTGATACACTTCTTCTCGCCATAG 924 0.5238 MPMELEQELGSTTIQRSFDARYTRHARDSLGELPDSFTITDPSIPGHPIVFASPGFLKLTGYSLREVLGRPAAIFQGPRTSRKSVIEIREAVREERNAQVVLLNYRRDGTPFWMLFRVSPVFSSDGGAVVHFVAVQVPLQKKEGSGVRDFGFGCCRKEVCVDSLAEIDRVCSLEQVLEPDVREVEREEPCEASDDEKRSAVTAMDSIFSVLTHYSEATGRLVCRKRSSIPDVGLLSTSLIISLGRIKQSFVLTNPHLPDMPIVYASDAFLKLTGYAKNEVLGHNCRFLGGTDTDTSTLHLVIHFFSP 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00208 307 PANTHER PROTEIN TWIN LOV 1 14 299 - -
Gma02g00208 307 ProSiteProfiles PAS repeat profile. 49 70 IPR000014 -
Gma02g00208 307 Pfam PAS domain 35 136 IPR000014 -
Gma02g00208 307 Pfam PAS domain 249 290 IPR000014 -
Gma02g00208 307 PANTHER PROTEIN TWIN LOV 1 14 299 - -
Gma02g00208 307 TIGRFAM sensory_box: PAS domain S-box protein 49 130 IPR000014 -
Gma02g00208 307 CDD PAS 33 127 IPR000014 -
Gma02g00208 307 ProSiteProfiles PAS repeat profile. 262 307 IPR000014 -
Gma02g00208 307 SUPERFAMILY PYP-like sensor domain (PAS domain) 252 297 IPR035965 -
Gma02g00208 307 SUPERFAMILY PYP-like sensor domain (PAS domain) 34 134 IPR035965 -
Gma02g00208 307 Gene3D PAS domain 36 212 - -
Gma02g00208 307 Gene3D PAS domain 249 302 - -
Gma02g00208 307 SMART pac_2 99 142 IPR001610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00208 Gma-Chr2 1989149 1993214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00208 21 301 AGC Kinase Gene Family AT5G58140 30.581 1.32e-42 154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00208 02 1989149 1993214 Gma02g00208 02 1989149 1993214 ECH