Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00205 ATGGGGTTGGGTGCTGAGAATGGCAAGGTGGTGGAGTCTTGGGATGTGTGTAAATCAAAGGGGAGGAAGAAGAAGAAGGGGGATGAAGGGGGTGAGGCTGAGGCTGGGTGTTGGGTTAGGTTGAGGTTCATTGGGAGCTGCATTTCTTCAAGATCCAAGGTTGATACCTCAGTCAGTGGCAGTGGCACCAGTACTCATTATGCTGAAAGTAAATCAACTAATGATACTAGTAGAGACCAACCAACAGCCCCAGCAGTCTCTTCTACAACCACTAGTAATGCTGAAAGCAATTCATCATCCACTTCCAAGCTTGAAGAAGAGCTTAAAATTGCTTCCAGGCTGCGAAAGTTCTCTTTCAATGAACTCAAGTTAGCAACAAGAAATTTCCGACCTGAAAGTTTTCTTGGTGAAGGTGGGTTTGGTTGTGTTTTCAAGGGGTGGATTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGACTTACGGTTGCTGTAAAAACCCTAAACCATGATGGGCTCCAGGGTCATAAAGAATGGCTGGCTGAAGTGAATTTTCTTGGTGACCTAGTTCATCCAAACCTTGTTAAACTTGTAGGTTACTGCATTGAAGAGGATCAAAGGTTGCTAGTGTATGAGTTCATGCCTCGGGGTAGCCTGGAAAACCACTTATTTAGGAGATCCATTCCTCTTCCATGGTCCATTAGAATGAAAATTGCACTAGGAGCTGCTAAGGGTCTTGCTTTTCTTCATGAAGAAGCTGAACGACCAGTAATATATAGGGATTTTAAAACTTCAAACATATTACTGGATGCAGTAAGTGTCAAAAACTACAATAAGATTGCATTTCCCCCTTTTTATCAGTCTAATATTGTACCGATTCAGGAGTACAATGCCAAGCTCTCAGATTTTGGTCTTGCCAAAGATGGTCCAGAAGGTGATAAAACCCATGTGTCTACTCGAGTGATGGGAACCTATGGTTATGCAGCACCAGAATATGTCATGACGGGTCATCTTACATCAAAAAGTGATGTGTACAGTTTCGGAGTGGTACTACTTGAGATGTTGACCGGCAGAAGATCCATGGACAAACACCGACCCAACGGTGAGCATAACCTTGTGGAATGGGCTCGGCCACATCTAGGAGAGAGAAGAAGGTTCTACAGGTTGATAGACCCTCGCTTGGAAGGCCATTTTTCGGTAAAAGGAGCTCAGAAAGCTGCCCTACTGGCTGCTCACTGCCTTAGTAGAGATCCAAAAGCCAGACCCCTAATGAGTGAAGTTGTGGAAGCTTTAAAGCCTTTGCCAAACCTCAAGGACATGGCAAGCTCTTCATATTATTTCCAGGCAATGCAAGCTGACCGCATTGGAGCGAGCCCAAACACAAGAAATGGGCGAATGCAAGGAGCGTTGCTCACCCGCAATGGACAGCAGCAAAGGAGCCTTTCAATACCAAATGGTACTTATGCATCTCCATATCACCATCAGTTTCCCCAACCATCACCAAAACCCAATGGCAAAGCATAG 1527 0.4506 MGLGAENGKVVESWDVCKSKGRKKKKGDEGGEAEAGCWVRLRFIGSCISSRSKVDTSVSGSGTSTHYAESKSTNDTSRDQPTAPAVSSTTTSNAESNSSSTSKLEEELKIASRLRKFSFNELKLATRNFRPESFLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLVGYCIEEDQRLLVYEFMPRGSLENHLFRRSIPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVSVKNYNKIAFPPFYQSNIVPIQEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKHRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSVKGAQKAALLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQAMQADRIGASPNTRNGRMQGALLTRNGQQQRSLSIPNGTYASPYHHQFPQPSPKPNGKA 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00205 508 SUPERFAMILY Protein kinase-like (PK-like) 113 445 IPR011009 -
Gma02g00205 508 Pfam Protein tyrosine and serine/threonine kinase 134 432 IPR001245 GO:0004672|GO:0006468
Gma02g00205 508 MobiDBLite consensus disorder prediction 474 508 - -
Gma02g00205 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Gma02g00205 508 Gene3D Phosphorylase Kinase; domain 1 87 214 - -
Gma02g00205 508 PANTHER OS01G0588500 PROTEIN-RELATED 285 498 - -
Gma02g00205 508 PANTHER OS01G0588500 PROTEIN-RELATED 60 272 - -
Gma02g00205 508 Gene3D Transferase(Phosphotransferase) domain 1 215 453 - -
Gma02g00205 508 MobiDBLite consensus disorder prediction 53 102 - -
Gma02g00205 508 ProSitePatterns Protein kinases ATP-binding region signature. 135 167 IPR017441 GO:0005524
Gma02g00205 508 ProSiteProfiles Protein kinase domain profile. 129 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g00205 508 MobiDBLite consensus disorder prediction 474 495 - -
Gma02g00205 508 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 285 498 - -
Gma02g00205 508 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 60 272 - -
Gma02g00205 508 CDD STKc_IRAK 135 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00205 Gma-Chr2 1952753 1956079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00205 75 432 Glycoside Hydrolase AT3G07070 50.416 1.27e-113 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gma02g00205 PK_Tyr_Ser-Thr 4.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00205 - - gmx:100305443 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00205 02 1952753 1956079 Gma02g00205 02 1952753 1956079 ECH