Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00196 ATGGCGGAGGATGCTAGAGAAGGAAGGGGTGGGGCGTGTGAGTTGCACATGGGAGTCGCCATTGTCGACAGCGGCAACAAAGACAACGTGGGCGTCGCAAAGGAAGTAGATGTTATCGAGAATCAAGATCTTGAATCAGCTAAAGGGGAAACAATGGGAGAGGCTAGAGAAGAAAACAAGATGTTAGAATTCTTTGAGATTCTTCAACAAGATAAACCTGAAGATGCTACAAATGCTAAAGGTGTGTTTAGCCATGATGAGGAAAATGAAGAAAGTGAACTTGTGTCACTTTCTCTTGGGATATCAATATCAAAAGGCAAGCCTACCAAGGATGAGAAAATATTGAAAAACAAAAATGGAATTGAAAAGACAGAAGATGAGGATGTGCATAATAAAAGACTTGTGCTTGGGTTAGATATCAATTTGGACCCTGTAGATCAAGATGAATTGACTGCAAATAATTCCACCACTGAAAGTAGCTTTGTTGGTGAGAGAGGGAAGGAAGAGGAACCAACTGAGATGTGGCCACCCAGTAAAGTTTTGAAGACAATGAAAAGTGTGGATAAAAGTGAAGTTTCTCAACATGATCAGCCCAAGAAGACTAGGGTTTCTATTAGAGCCAGATGTGATACCCAAACGATGAATGATGGGTGCCATTGGAGAAAATATGGACAGAAAATGGCCAAAGGAAATCCATGCCCCCGAGCTTACTATCGATGCACTGCTTCTCCATCTTGTCCTGTAAGAAAACAGGTGCAAAGATGTGCTGAAGACATGTCCATATTGATTACCACCTATGAAGGAACTCACAATCACCCTCTTCCTATGTCAGCCACTGCAATGGCCTGCACAACTTCTGCTGCAGCTTCCATGCTCCAATCTCCCTCATTGAGTTCACAACATGGATTAGTTGATTCAGCTATATCCTCCATCATCAACTCTAGTGCTCCTTATTACAACCCTAATAATGCTCTAAACTTCTCTACACACCAAGTTTCAAGACCACAACAATTCTACTTCCCCAACTCATCCATTTCAACCTTGAATTCTCACCCCACAATCACTTTAGATCTTACAACACCTCCAACTTCTTCCTCAAACTCAAGCTTCACTTGCATGCCAAAATACTCATCAACAAACCTTAACTTTTCCTCAGGTTTCTCTCCTCTGCATTCTAGCATGCCGCAATCACCTTGGAACAGTTATAGTGGTTACTTCAACTCTGGAACACTTTCTCAAAATAGACACCATGGTGGTAATTACATGTTAAACACGGGAAATCAAAATCAACCACATTCTCTAGGGCATCTCCATCAACCTATTTACATGAGCAACAATAGTACCATTTCTCAGCATTCTTTCCCTAATCCCATTGTTGCTGCAACTGAGGCAATAATCACAAGCAACCCAAAATTTCAATCAGCACTAGCAACTGCTCTCACAGCATATGTTGGCAATGAAGCTAGTGGTGGTAGGTTAAGAGAAAATCATGTTCTTGAGAATGCAGAACTGATGAACTTAAAGCTGCTACGCAGTGAAAATAGTATAGGAAACTCAAGTATATTTCCACTACCACTACCGGAGCAATGGAAGTGA 1596 0.4148 MAEDAREGRGGACELHMGVAIVDSGNKDNVGVAKEVDVIENQDLESAKGETMGEAREENKMLEFFEILQQDKPEDATNAKGVFSHDEENEESELVSLSLGISISKGKPTKDEKILKNKNGIEKTEDEDVHNKRLVLGLDINLDPVDQDELTANNSTTESSFVGERGKEEEPTEMWPPSKVLKTMKSVDKSEVSQHDQPKKTRVSIRARCDTQTMNDGCHWRKYGQKMAKGNPCPRAYYRCTASPSCPVRKQVQRCAEDMSILITTYEGTHNHPLPMSATAMACTTSAAASMLQSPSLSSQHGLVDSAISSIINSSAPYYNPNNALNFSTHQVSRPQQFYFPNSSISTLNSHPTITLDLTTPPTSSSNSSFTCMPKYSSTNLNFSSGFSPLHSSMPQSPWNSYSGYFNSGTLSQNRHHGGNYMLNTGNQNQPHSLGHLHQPIYMSNNSTISQHSFPNPIVAATEAIITSNPKFQSALATALTAYVGNEASGGRLRENHVLENAELMNLKLLRSENSIGNSSIFPLPLPEQWK 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00196 531 MobiDBLite consensus disorder prediction 149 174 - -
Gma02g00196 531 PANTHER WRKY TRANSCRIPTION FACTOR 72B 34 531 - -
Gma02g00196 531 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 34 531 IPR044810 GO:0003700
Gma02g00196 531 SUPERFAMILY WRKY DNA-binding domain 207 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma02g00196 531 SMART WRKY_cls 214 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g00196 531 ProSiteProfiles WRKY domain profile. 209 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g00196 531 Pfam WRKY DNA -binding domain 215 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g00196 531 Gene3D WRKY domain 199 276 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00196 Gma-Chr2 1870808 1877287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00196 6 487 WRKY Transcription Factor Family AT1G18860 37.345 1.59e-59 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma02g00196 WRKY 5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00196 - - gmx:100809801 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00196 02 1870808 1877287 Gma02g00196 02 1870808 1877287 ECH
Gma02g00196 02 1870808 1877287 Gma06g01704 06 17151477 17156609 ECH
Gma02g00196 02 1870808 1877287 Gma04g01680 04 45770569 45776711 ECH
Gma02g00196 02 1870808 1877287 Gma05g00281 05 2533087 2538635 ECH
Gma02g00196 02 1870808 1877287 Gma17g00922 17 7867378 7873082 ECH
Gma02g00196 02 1870808 1877287 Gma19g00181 19 2218178 2221556 ECH