Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00190 ATGGGGAAAGGAAGAAGTCCTGGGAAATGGTTCAAGAATTTACTCTTGGGGAAGAAATCGTCTTCAAAGTCTACTTCATCAAAGAAGAATGACATTTTTAAACCTTCAATTGACAAGGATTTGCTGGTGTCGTCTGAGGTACCCGTGCCTGATCCAACCATGGATTCGTTGCAGATATCCACACCAATATCTGGAGCTAATGATTATAAAGGAGTGTTTTCCGAAAAGGAGGTAGTTAGTAGGTCATCACATGATAGGGATGTTCTTTCAACTAGAGTCAAAGAAGCTAAGGTGCAAGATGTTGCTAATTTTGGATCTCAAGAGAATCTTGAGAAACTCCAGCTTACGGAAGCAACTATAAAAGTTCAGGCTGCTTGTAGAAGTTATCTGGCTCGTCGAACATTGCAAAAACTCAAAGGTGTCATACAACTGCAAGCTTTTATTCGTGGCCACTTGGTTAGAAGACACGCTGTTTCTGCATTATATTGTGTGAAGGGAATAGTTAAATTTCAAGCATTGGCTCGTGGTTACAATGTTAGATGCTCTGATATTGGGCTTGCAGTCCAGAAAATTCGTAAGGATACTCATTGCTCAAATTCTGTTCGGGTAGTTTCGTCCACACAGGCAGAGAAGTTGTCTGAAAATGTCTTTGTTTGCAAGCTTCTGGCTTCATCCCCATATGCAGTTCCTCTATCACTCAACAGTGATCCTGGAGAACCTAACATGGGTCAGAAGTGGCTTGACTATTGGACAAGGTCCCACTTTTGGGCATCTCTTCCTGAATTTAAAAAGAAACTTGAGTCAGTGTCTGATGAGAAAAATGGCACTTCTCAGACAGTTCAAAAGGGGCAAGTTAAAAAAATTACTCGGAAATCTCCTACTGTGAAAGCTGACAATGTCTCAAATTTAGGTTCTAACAAATCTAAACAGCATCTGAAAAAGGATTCAAGCCACCCATTGCCTTCAGCTCAGGAAAACCCACCAAAAGAAACTGAGAAAAGTAGTTTTGGAAAGACTCATGCGCATAATGCTTCAAATGGATCTGAGGTTGTTAATGAAAAAAGAAAATCCGGCAATAAAAAGATTTTGGATCATGCTGTCATTGATGTTTCAGAGCAGGGCCCAAATGCCTCTTCAGCGAAAGAGAAAGATTCGACTGTGCCAAAGTCAAAAGAGTCTGATCCTGAGAAAGGTCATGGACAGCAAACAAAAGACAAGAATGATAATGAGCCACATAATGATCCCATTGCTGTCTCAAAGACAAGTGTGAAGAAGGGTGGAAATGAAGGAATTCAAGTAGTCAGTGAGAATTTGAATGGTGGTGACAATTGTATCAGTAACAATAGCCAAAGAAGAGCTTCACTACCTGCTAACATTAATGAACAAGAGAATGAGTTATATAACACTCCTGTTACTCCAAGACTGCCCAGTTACATGGCTCCTACTGAATCTGCAAAAGCTAGGCTAAGAGGACAAGGCTCTCCAAGATTTACTACTGATTTGGTAGACAAAAACAGTGCAACCAGGCGGCATTCACTTTCATCCTCACTTAATGGCAAGTCAGGTTCATTTTCCCCGAGAGCTGAAAAGCTGATAGGCGTAAGCAGTAGAGGAGGGATAAGGTCTGATAGATCTCTGTCATCTTCAAGGGATGGGACTGAGAAGTTGATCCAACCTCAGTGGAGAAGGTGA 1692 0.4125 MGKGRSPGKWFKNLLLGKKSSSKSTSSKKNDIFKPSIDKDLLVSSEVPVPDPTMDSLQISTPISGANDYKGVFSEKEVVSRSSHDRDVLSTRVKEAKVQDVANFGSQENLEKLQLTEATIKVQAACRSYLARRTLQKLKGVIQLQAFIRGHLVRRHAVSALYCVKGIVKFQALARGYNVRCSDIGLAVQKIRKDTHCSNSVRVVSSTQAEKLSENVFVCKLLASSPYAVPLSLNSDPGEPNMGQKWLDYWTRSHFWASLPEFKKKLESVSDEKNGTSQTVQKGQVKKITRKSPTVKADNVSNLGSNKSKQHLKKDSSHPLPSAQENPPKETEKSSFGKTHAHNASNGSEVVNEKRKSGNKKILDHAVIDVSEQGPNASSAKEKDSTVPKSKESDPEKGHGQQTKDKNDNEPHNDPIAVSKTSVKKGGNEGIQVVSENLNGGDNCISNNSQRRASLPANINEQENELYNTPVTPRLPSYMAPTESAKARLRGQGSPRFTTDLVDKNSATRRHSLSSSLNGKSGSFSPRAEKLIGVSSRGGIRSDRSLSSSRDGTEKLIQPQWRR 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00190 563 PANTHER IQ-DOMAIN 5-RELATED 1 560 - -
Gma02g00190 563 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 560 - -
Gma02g00190 563 MobiDBLite consensus disorder prediction 338 352 - -
Gma02g00190 563 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 180 IPR027417 -
Gma02g00190 563 MobiDBLite consensus disorder prediction 540 555 - -
Gma02g00190 563 MobiDBLite consensus disorder prediction 272 307 - -
Gma02g00190 563 SMART iq_5 137 158 IPR000048 GO:0005515
Gma02g00190 563 SMART iq_5 114 136 IPR000048 GO:0005515
Gma02g00190 563 MobiDBLite consensus disorder prediction 487 563 - -
Gma02g00190 563 ProSiteProfiles IQ motif profile. 137 166 IPR000048 GO:0005515
Gma02g00190 563 Pfam IQ calmodulin-binding motif 139 156 IPR000048 GO:0005515
Gma02g00190 563 Pfam IQ calmodulin-binding motif 165 181 IPR000048 GO:0005515
Gma02g00190 563 Pfam IQ calmodulin-binding motif 116 135 IPR000048 GO:0005515
Gma02g00190 563 Gene3D - 113 162 - -
Gma02g00190 563 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Gma02g00190 563 MobiDBLite consensus disorder prediction 384 413 - -
Gma02g00190 563 MobiDBLite consensus disorder prediction 353 367 - -
Gma02g00190 563 Pfam Protein of unknown function (DUF4005) 462 542 IPR025064 -
Gma02g00190 563 MobiDBLite consensus disorder prediction 498 523 - -
Gma02g00190 563 MobiDBLite consensus disorder prediction 268 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00190 Gma-Chr2 1835633 1840918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00190 4 563 IQD Protein Family AT1G14380 32.911 2.16e-78 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00190 - - gmx:100808200 1063.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00190 02 1835633 1840918 Gma02g00190 02 1835633 1840918 ECH
Gma02g00190 02 1835633 1840918 Gma06g01707 06 17208312 17218562 ECH
Gma02g00190 02 1835633 1840918 Gma04g01676 04 45580518 45587717 ECH
Gma02g00190 02 1835633 1840918 Gma05g00278 05 2504957 2512810 ECH
Gma02g00190 02 1835633 1840918 Gma17g00925 17 7894922 7902093 ECH